Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1368.g08202.01.t

Possible name(s)

RPL7; RPL7L1

Gene model

Haaura.CG.MTP2014.S1368.g08202

Location

S1368 [8,253 / 9,101]

Sequences

Amino acid sequence

Length: 245

>Haaura.CG.MTP2014.S1368.g08202.01.p
MVEGKKLPKVPESLLKKRKAYQAQKAKQAQNAILNRKKNKEKRKLIFKRAEQYVKEYKRK
ERETIRLKRMARKHDNYYVPDQPKLAFVIRIRGINQVSPKVRKILQLLRLRQINNAVFVK
LNKASATMLRIAEPYITWGYPNLKTVRELMYKRGHGKVDKRRIPLTDNTIVEETLGKKGI
ICVEDLIHEIFTVGDNFKEANNFLWPFKLSCPRGGFRKVTNHVVEGGDYGDREDKINMLV
RRMN*

Nucleotide sequence

Length: 735

>Haaura.CG.MTP2014.S1368.g08202.01.t
ATGGTGGAAGGGAAAAAATTACCTAAGGTCCCAGAATCTTTGCTTAAAAAACGCAAAGCC
TACCAAGCACAAAAGGCCAAGCAGGCGCAGAATGCTATATTGAACCGAAAGAAGAACAAG
GAGAAGAGGAAGCTCATTTTCAAGCGAGCCGAGCAGTATGTGAAGGAATATAAGAGGAAG
GAACGCGAGACCATACGTCTGAAACGTATGGCTAGAAAGCACGATAACTATTACGTGCCG
GATCAACCCAAGCTAGCATTTGTGATCAGAATTAGGGGCATAAACCAAGTCAGCCCCAAA
GTCCGTAAAATCCTGCAGTTGCTCCGTCTACGTCAAATTAACAATGCTGTGTTTGTGAAG
CTGAACAAGGCCAGCGCAACGATGCTTCGCATTGCCGAACCCTACATCACATGGGGCTAC
CCCAACCTGAAGACGGTACGGGAACTCATGTACAAACGGGGACACGGGAAAGTGGACAAG
CGCAGGATCCCGCTCACTGACAACACTATTGTAGAGGAGACTCTTGGTAAGAAGGGGATC
ATCTGTGTGGAAGATCTCATCCACGAAATATTCACGGTTGGCGACAACTTCAAGGAAGCG
AATAACTTCCTTTGGCCGTTCAAGTTATCTTGCCCTCGTGGAGGTTTCCGTAAGGTCACT
AATCATGTTGTGGAAGGAGGTGACTATGGCGACCGAGAGGATAAGATAAACATGCTTGTG
CGTAGAATGAACTGA

InterProScan

Pfam	Ribosomal_L30_N (IPR012988) - T[10-81] 7.0E-29
TIGRFAM	Ribosomal_L7_euk (IPR005998) - T[11-244] 2.1E-103
SUPERFAMILY	L30_ferredoxin-like_sf (IPR036919) - T[85-244] 1.44E-58
CDD	Ribosomal_L7_euk_arc (IPR035808) - T[85-244] 4.70718E-90
Pfam	Ribosomal_L30_ferredoxin-like (IPR016082) - T[86-136] 7.8E-23
Gene3D	L30_ferredoxin-like_sf (IPR036919) - T[88-141] 8.4E-31 - T[205-232] 8.4E-31
ProSitePatterns	Ribosomal_L30_CS (IPR018038) - T[104-136] .
Gene3D	Ribosomal_L30_central_dom_arc (IPR023106) - T[142-204] 8.4E-31

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL7_HUMAN	65 %	324	2.72E-113
RL7L_HUMAN	49.174 %	231	1.71E-76