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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1377.g08225.01.t

Possible name(s)

DOC2B; RPH3A

Location

S1377 [11,189 / 18,521]

Sequences

Amino acid sequence

Length: 683

>Haaura.CG.MTP2014.S1377.g08225.01.p
IKLDDLSIAIIQMESSSWICPNDRHLSLRAKLRSGWSVRTGQGGRKGPSKLNEEELQQIK
NVIKRASMLENMEQERIGSLVNRLNIMQQNSMGNGQTSCILCGEQFRKFSGNTPIICTDC
KRKVCHKCSVDCCTKAKLLPIKTNQQVLTQNYMCKLCSENRELWKRSGAWFFHSIPVYKL
PVEETATSRQQTFDHSDSVKYRKIASLAPPDSPAFVRSHSRTLSGGSVGSYQWAKSAKLC
TPSVSSSGEDSSDDGITLGKANKLKGLHSGVSIDTASLASTPSTNADHMSISSSSPAGFS
NKGSNRSSFRSVGSRHSSTRRRQKQQYVHHSTDDDSISIDSRSTEMSVDDMSTLHGGVNN
IPIVKTEDASSEDDKENNGYLEFSLLYDPLKSALHVSIIKGKNLCPKDSNGFSDPYVKLH
LLPGFSKATKLRTKTVLKTLNPEFNETLVYWGIGEEELPTRKLRLTVLDEDRFSKNDFLG
EVIIPLDEIVPTEKKFHNVPLEEMHILSSSDKITKDPGRIHVGLRFNTNEHCLVITIYRC
ANLLIKNPTDNVNPFVKVSLVLDNGKTLVQKTEVKKKNPNPAFNQEIKFKVPPENGHAVV
ARGHLHISVLHKDALGQQLIGTMSLGVSSEGEKLRHWFNCLKHPNQQFDSWHTLLSESPK
KFKQRSPASDSPRKKKKDGRKA*

Nucleotide sequence

Length: 2,049

>Haaura.CG.MTP2014.S1377.g08225.01.t
ATCAAGTTAGACGATTTGTCAATTGCTATTATTCAAATGGAATCTAGTTCGTGGATATGT
CCGAATGATCGTCATCTATCTCTTAGAGCTAAACTCAGGTCGGGTTGGTCTGTTAGAACT
GGACAAGGTGGTCGTAAAGGTCCGTCAAAACTCAACGAAGAAGAACTACAGCAAATTAAA
AATGTTATCAAACGGGCATCTATGCTTGAAAACATGGAACAAGAAAGGATAGGTTCTCTT
GTGAACCGTCTGAACATAATGCAACAAAATTCAATGGGAAATGGACAAACGAGCTGCATA
TTATGTGGTGAACAGTTCAGAAAATTTTCTGGCAACACACCAATTATTTGCACAGATTGC
AAACGGAAAGTATGCCACAAGTGCTCAGTTGATTGTTGTACGAAGGCCAAACTGTTGCCA
ATAAAGACAAATCAACAGGTTTTGACTCAGAACTACATGTGCAAGTTATGTAGCGAAAAC
AGAGAACTGTGGAAACGTTCCGGTGCTTGGTTTTTTCACTCCATTCCTGTCTACAAACTC
CCAGTAGAGGAAACTGCAACATCAAGACAGCAAACGTTTGATCATAGCGATTCGGTAAAA
TACAGAAAAATTGCTTCTCTTGCTCCACCTGATTCACCAGCATTTGTGAGGAGTCATTCC
AGAACTTTGTCTGGAGGTTCTGTTGGATCTTATCAATGGGCGAAGTCTGCGAAACTGTGT
ACTCCAAGCGTAAGCAGTTCTGGAGAAGATAGCTCAGATGATGGAATAACATTAGGAAAA
GCAAACAAACTGAAAGGTTTACATTCAGGTGTCAGCATCGACACTGCGAGTCTGGCTAGC
ACTCCTAGTACTAACGCTGATCATATGTCCATTTCATCTTCTAGCCCAGCTGGTTTCTCC
AACAAAGGTTCCAACAGAAGCTCTTTCCGTTCGGTCGGGAGCAGGCACAGTTCAACAAGG
AGGAGACAAAAACAACAATACGTGCATCACAGCACAGATGATGATTCAATTTCTATTGAC
AGTCGATCCACAGAAATGTCGGTTGATGACATGTCCACTTTACATGGTGGTGTGAATAAC
ATTCCAATTGTAAAAACTGAGGACGCATCTTCAGAAGATGATAAAGAAAACAATGGTTAT
CTGGAGTTTTCTCTTCTGTATGACCCACTCAAATCAGCATTGCATGTTAGCATAATAAAA
GGAAAGAATTTATGCCCCAAAGACAGCAATGGTTTTTCCGATCCATACGTAAAGTTGCAT
CTTCTTCCTGGTTTTTCGAAGGCTACGAAACTAAGAACGAAAACTGTCTTGAAGACTCTC
AATCCTGAATTTAATGAAACTTTGGTTTACTGGGGAATAGGAGAAGAGGAATTGCCAACT
AGAAAACTACGACTGACTGTTCTTGATGAGGATAGGTTCAGCAAGAATGATTTCCTTGGG
GAAGTAATCATTCCACTGGATGAAATTGTCCCAACTGAAAAAAAGTTCCACAATGTTCCA
CTTGAAGAAATGCACATTCTATCATCTAGTGACAAGATAACCAAAGATCCTGGAAGAATT
CATGTGGGTCTTCGATTCAACACGAACGAACATTGCCTCGTCATCACCATTTATCGATGT
GCAAATCTTCTTATAAAAAATCCGACTGATAATGTCAATCCTTTTGTCAAAGTATCACTT
GTTCTTGATAATGGTAAAACATTGGTCCAAAAAACTGAAGTAAAAAAGAAGAATCCAAAC
CCAGCGTTTAACCAGGAAATAAAATTTAAAGTTCCCCCGGAAAACGGACACGCTGTTGTC
GCAAGAGGTCATCTTCACATATCTGTTCTCCATAAAGATGCATTGGGACAACAGTTGATT
GGGACTATGAGTCTTGGTGTCAGTAGCGAGGGTGAGAAACTGCGTCACTGGTTCAACTGC
TTGAAACATCCAAATCAACAGTTTGATAGCTGGCACACGTTGCTTAGCGAATCTCCAAAA
AAATTCAAACAACGTAGCCCAGCATCTGATTCGCCAAGGAAAAAGAAAAAGGATGGCAGA
AAAGCGTAA

InterProScan

PANTHER
RPH3A (IPR028698) - T[10-658] 2.0E-116
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[44-186] 1.6E-28
ProSiteProfiles
Rab_BD (IPR010911) - T[45-174] 12.776
SUPERFAMILY
Znf_FYVE_PHD (IPR011011) - T[50-177] 1.25E-20
ProSiteProfiles
Znf_FYVE-rel (IPR017455) - T[93-162] 8.777
Gene3D
C2_domain_sf (IPR035892) - T[365-506] 1.8E-39 - T[507-660] 2.4E-34
PRINTS
Synaptotagmin (IPR001565) - T[381-396] 9.6E-8 - T[396-409] 9.6E-8 - T[454-469] 9.6E-8 - T[474-484] 9.6E-8
ProSiteProfiles
C2_dom (IPR000008) - T[390-483] 18.73 - T[533-624] 11.788
SMART
C2_dom (IPR000008) - T[393-498] 2.1E-19 - T[532-639] 5.3E-14
Pfam
C2_dom (IPR000008) - T[394-499] 2.9E-23 - T[533-639] 3.4E-16
PRINTS
C2_dom (IPR000008) - T[409-421] 9.7E-7 - T[438-451] 9.7E-7 - T[463-471] 9.7E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DOC2B_HUMAN 42.517 % 239 3.96E-72
RP3A_HUMAN 40.196 % 224 5.85E-64
DOC2A_HUMAN 38.17 % 209 2.97E-61





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