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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'Moocul.CG.ELv1_2.S64...' > 
  3. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S138.g02561.01.t

Possible name(s)

LAMC1; LAMC3; NTN1

Gene model

Haaura.CG.MTP2014.S138.g02561

Location

S138 [70,658 / 71,725]

Sequences

Amino acid sequence

Length: 140

>Haaura.CG.MTP2014.S138.g02561.01.p
MRQLKMSRNWLVLAICFLEFLAPDLVRAMNECYNPKTNDPQVCLPPFVNAAFGKPVVATN
TCGQTEPEQYCLQTGVTGVTKSCHQCYSKNRSMHHDPDFLTDISDERKPTWWQSQTMLAD
VQHPSMVNLTLDLGKFFFL*

Nucleotide sequence

Length: 622

>Haaura.CG.MTP2014.S138.g02561.01.t
ATGCGGCAATTAAAGATGTCAAGGAACTGGCTTGTACTGGCTATATGCTTTCTAGAATTT
CTAGCCCCCGATTTAGTAAGAGCTATGAACGAATGTTACAATCCGAAAACGAATGATCCT
CAAGTGTGCCTACCACCTTTCGTCAACGCTGCGTTTGGAAAACCCGTAGTTGCGACCAAT
ACATGTGGGCAGACCGAGCCCGAGCAGTATTGTCTTCAAACGGGGGTAACTGGTGTTACG
AAATCCTGTCATCAATGTTATTCAAAGAACAGAAGCATGCATCACGACCCCGATTTTCTG
ACCGACATTAGCGACGAACGGAAACCAACGTGGTGGCAATCTCAAACCATGCTTGCTGAC
GTTCAACATCCGTCAATGGTCAACCTGACTCTCGACCTCGGTAAGTTTTTTTTTCTCTGA
TAAAAAGTAGTTTTCGAATTAATAATTTAAACGCACGAACACCGGGTCGTTGATGTGTTA
ATCCCGATTCCAAGCAAAACCGCATGTTATCTGCCACCGGTGACCGGTTTTAGAAAGTTA
TGTGTTTAAACGTGTAAGAACGATTGACAGCAATGGTTGAATATACCTGATATACTTGAT
CTTAAATATAAGGGCAATTCAA

InterProScan

Gene3D
Laminin_N_sf (IPR038684) - T[25-139] 2.7E-32
SMART
Laminin_N (IPR008211) - T[37-139] 3.6E-5
ProSiteProfiles
Laminin_N (IPR008211) - T[39-139] 21.328
Pfam
Laminin_N (IPR008211) - T[43-137] 2.1E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LAMC1_HUMAN 55.725 % 132 1.54E-36
LAMC3_HUMAN 41.071 % 97.4 1.75E-24
NET1_HUMAN 44 % 73.9 2.77E-16