- Clone 'AHC0AAA172YF15' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1412.g08289.01.t
Possible name(s)
SMAD3; SMAD4; SMAD5
Gene model
Location
S1412 [14,106 / 16,493]
Amino acid sequence
Length: 515
>Haaura.CG.MTP2014.S1412.g08289.01.p
MAMPSHGPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELEGLIAAIT
TNGAHPTTCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDLHKNELKHLKICKYAFDLK
CDSVCINPYHYERVVSPGIDLSGLTLQHTAPAAPLLSIDYRDMKTEADKLGHLSGNCDSI
SGQSIQRQVNDYKNVQEGLGSSSSTNIGYPSTNNSLTPSQTVPSASQQLMQYSQRNGQMN
WQTSNTAQYTPDMNSPVNATYYPGGSDINYMPISNHPPPEFWCSITSYEMDVQVGETFKV
PASCPAVTVDGYVDPSGGDRFCLGQLSNVHRTEASEKARLHIGKGVQLVCHGEGDVWVKC
LSDHAVFVQSYYLDREAGRAPGDAVHKIYPNAYIKVFDLRQCYRQMQQQAATAQAAAAAQ
AAAVAGNMPGPGSVGGIAPAVGLPGLSVAAGIGVDDLRRLCILRMSFVKGWGPDYPRQNI
KQTPCWIEIQLHRALQLLDEVLHTMPIAEPHPHD*
Nucleotide sequence
Length: 1,545
>Haaura.CG.MTP2014.S1412.g08289.01.t
ATGGCTATGCCTTCGCATGGTCCGACTTCTAACGATGCTTGCTTGAGTATTGTTCACAGC
CTGATGTGTCACAGGCAAGGAGGGGAAAGTGAAACGTTCGCTAAGCGAGCAATCGAGAGC
CTGGTTAAAAAACTGAAGGAAAAAAAAGATGAATTGGAGGGACTGATTGCTGCGATTACA
ACAAATGGTGCTCATCCAACGACTTGCGTCACAATACAACGTACGCTAGATGGGAGATTG
CAGGTTGCAGGAAGAAAAGGATTTCCCCATGTTATTTATGCTCGCCTCTGGCGATGGCCA
GATCTCCATAAAAACGAACTTAAGCATCTTAAGATATGTAAATATGCGTTCGACCTAAAG
TGTGACTCGGTTTGCATCAACCCTTATCACTACGAGAGAGTCGTATCCCCAGGAATAGAT
CTTTCGGGTCTTACGCTTCAACACACAGCACCTGCCGCACCTCTTCTCTCCATAGACTAT
AGAGACATGAAGACCGAAGCCGATAAGTTGGGACACCTCAGCGGTAACTGCGACAGCATT
TCCGGACAGAGTATTCAACGTCAGGTTAATGATTATAAAAATGTCCAAGAGGGATTGGGA
AGCAGCTCGTCGACCAACATCGGCTATCCATCAACTAATAATAGTTTAACTCCATCTCAG
ACAGTGCCTTCCGCTTCACAGCAACTTATGCAGTACAGTCAGAGAAACGGACAAATGAAT
TGGCAAACAAGCAACACAGCTCAGTACACTCCAGACATGAATTCACCAGTGAACGCCACT
TATTATCCTGGTGGGTCAGACATTAACTACATGCCCATCTCAAATCATCCACCGCCGGAA
TTTTGGTGCTCTATCACTTCATATGAAATGGATGTGCAGGTCGGGGAAACCTTCAAAGTT
CCAGCTTCCTGCCCCGCCGTAACTGTTGACGGTTACGTCGATCCTTCTGGTGGAGACAGG
TTTTGTCTTGGACAACTGTCAAACGTTCATAGAACAGAAGCTTCGGAAAAAGCAAGACTT
CATATAGGAAAAGGCGTTCAGCTGGTATGTCATGGCGAAGGAGACGTATGGGTAAAATGT
CTCAGCGACCATGCCGTCTTCGTTCAAAGTTACTATCTTGATCGGGAGGCAGGAAGGGCA
CCAGGAGATGCCGTGCATAAAATATATCCAAATGCGTATATCAAGGTGTTTGACCTTCGT
CAATGCTACAGACAAATGCAACAGCAAGCGGCTACAGCACAAGCCGCGGCAGCTGCACAG
GCTGCGGCTGTTGCAGGAAATATGCCTGGTCCTGGTTCTGTTGGAGGAATTGCCCCTGCT
GTTGGTCTTCCTGGCCTCTCTGTAGCAGCGGGTATAGGAGTAGACGATTTACGCAGGCTT
TGCATTCTTCGTATGAGCTTTGTCAAAGGCTGGGGTCCCGATTATCCTCGGCAAAATATC
AAACAGACGCCATGTTGGATAGAGATTCAGTTACACAGAGCGCTTCAGCTCCTTGACGAA
GTTCTGCACACCATGCCTATCGCAGAGCCTCATCCACATGACTAA
| PANTHER |
Dwarfin (IPR013790) - T[5-511] 4.3E-251 |
| Gene3D |
SMAD_MH1_sf (IPR036578) - T[7-138] 3.3E-62 |
| ProSiteProfiles |
MAD_homology_MH1 (IPR013019) - T[16-140] 35.466 |
| SUPERFAMILY |
SMAD_MH1_sf (IPR036578) - T[17-135] 1.24E-40 |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[29-138] 1.7E-63 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[35-135] 1.6E-39 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[261-506] 6.46E-89 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[273-511] 2.0E-113 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[280-492] 3.7E-112 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[280-492] 1.8E-75 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[282-514] 64.711 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD4_HUMAN | 68.784 % | 672 | 0 |
| SMAD3_HUMAN | 36.929 % | 261 | 5.39E-82 |
| SMAD5_HUMAN | 36.747 % | 253 | 9.92E-79 |