- Transcript 'Moocci.CG.ELv1_2.S42...' >
- Transcript 'Phmamm.CG.MTP2014.S7...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1473.g08396.01.t
Possible name(s)
CRIM1; SPON1; VWCE
Gene model
Location
S1473 [14,136 / 17,872]
Amino acid sequence
Length: 470
>Haaura.CG.MTP2014.S1473.g08396.01.p
AVDQCQRGHSESTWKVSSCITCECEGSEVVCTRPECPKLKCANQIRLPGECCPQCPEKLC
ESDDERRFKHGAEWHMGDCTFCECNKGKTLCSVEDCQIAACKNPVKGISQSINSAIFIAV
PGQCCPVCLDTTCKASNGTVIPAGEVWKEGVCMHCYCAGGERKCAKEKCPYINCTDAYTP
DGKCCQRCKTGLIDCFVTNWGFWSECPVQECGGGMRRRFRNTLIPSRNGGQFCPHRSEAQ
MCPRLPCEILPVCPVTDWTGWSLCTATCGYGHRMRSRGKTAVNKATMTSLIDCSQTHMQE
TMRCYAGACVPLDQLRGGLHEMALYDDICYDLKWAEWGDCSVACGVGSQRRHQVLIDESH
PRGHLCHLLDETRKCFGQKCFGSQAVRCKMSSWGHWTQCSKTCGSDRTRTRTRKVLTEPT
NGGRPCPNLTVTKSCKSKTCSNAYIQSQQPRTNKFASKNNASCIHAWKF*
Nucleotide sequence
Length: 1,445
>Haaura.CG.MTP2014.S1473.g08396.01.t
GCAGTGGATCAATGTCAGCGCGGTCATAGTGAAAGTACGTGGAAGGTCTCGAGTTGTATA
ACATGTGAATGCGAAGGTTCTGAAGTCGTCTGCACGCGACCTGAATGCCCAAAGCTTAAG
TGCGCGAATCAGATCAGACTACCGGGTGAATGTTGTCCACAATGTCCAGAAAAACTGTGC
GAATCTGACGATGAACGACGTTTCAAACATGGGGCAGAATGGCACATGGGAGACTGCACC
TTTTGTGAATGCAATAAAGGAAAGACGTTATGTTCGGTGGAAGACTGTCAAATTGCAGCA
TGCAAAAACCCGGTCAAAGGCATATCGCAATCAATTAACTCTGCTATTTTTATCGCAGTT
CCTGGACAATGCTGCCCAGTGTGTCTAGACACGACATGCAAGGCATCAAACGGTACTGTT
ATCCCAGCAGGCGAGGTCTGGAAAGAAGGTGTATGCATGCACTGTTATTGCGCCGGAGGA
GAACGGAAATGCGCTAAAGAAAAATGTCCCTACATAAACTGCACGGACGCCTACACGCCC
GATGGGAAATGTTGTCAAAGATGTAAAACAGGTTTAATCGACTGCTTTGTAACGAACTGG
GGATTTTGGAGCGAATGTCCAGTGCAAGAATGCGGCGGAGGGATGCGCAGGCGATTTCGT
AACACGCTAATACCGTCTAGAAACGGCGGTCAATTTTGTCCACATCGCAGCGAAGCGCAA
ATGTGCCCCAGGCTGCCGTGTGAAATACTCCCTGTTTGCCCCGTAACAGACTGGACTGGT
TGGAGTCTTTGTACGGCAACGTGCGGGTACGGTCACAGAATGCGGTCACGTGGGAAAACA
GCAGTTAACAAGGCAACCATGACGTCACTTATCGACTGTTCACAAACACACATGCAAGAA
ACGATGCGTTGTTATGCCGGGGCGTGCGTCCCTCTAGATCAGTTACGAGGAGGACTTCAC
GAAATGGCCCTATACGACGACATATGCTACGATTTGAAATGGGCTGAGTGGGGAGACTGT
TCGGTGGCGTGTGGCGTTGGATCTCAAAGGCGTCATCAAGTATTGATCGATGAGTCCCAC
CCCAGGGGTCACCTATGCCACCTACTCGACGAAACGCGGAAATGTTTTGGGCAAAAATGC
TTCGGTTCTCAAGCCGTGCGATGCAAAATGTCATCCTGGGGCCATTGGACTCAATGCTCT
AAAACGTGCGGATCGGATCGGACTCGTACGAGAACGAGAAAAGTATTAACGGAGCCGACA
AACGGTGGACGACCTTGTCCAAATCTGACTGTAACGAAATCCTGTAAATCTAAGACTTGT
TCGAACGCATATATCCAAAGTCAACAACCAAGAACAAATAAATTCGCTTCAAAAAACAAC
GCATCGTGCATTCATGCATGGAAATTTTAATGGGGCAATTGCCAGGTTATAGAGAAGATT
TCTCA
| SMART |
VWF_dom (IPR001007) - T[2-55] 0.006 - T[60-128] 4.0E-7 - T[133-188] 7.9E-5 |
| Pfam |
VWF_dom (IPR001007) - T[10-55] 3.6E-8 - T[64-128] 2.3E-7 - T[133-188] 6.1E-7 |
| ProSiteProfiles |
VWF_dom (IPR001007) - T[12-56] 9.207 - T[58-129] 9.935 - T[131-189] 10.308 |
| ProSitePatterns |
VWF_dom (IPR001007) - T[19-55] . - T[152-188] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[193-242] 8.0E-12 - T[252-309] 6.6E-8 - T[328-380] 5.2E-8 - T[386-440] 1.1E-11 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[193-242] 4.97E-8 - T[253-309] 2.22E-7 - T[329-380] 1.29E-7 - T[386-435] 1.44E-8 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[194-248] 9.941 - T[252-310] 9.685 - T[327-381] 9.08 - T[387-441] 10.91 |
| SMART |
TSP1_rpt (IPR000884) - T[197-248] 3.4E-8 - T[255-310] 1.7E-5 - T[331-381] 7.9E-7 - T[390-441] 1.5E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[199-247] 2.9E-6 - T[257-278] 1.6E-4 - T[333-380] 3.5E-8 - T[391-440] 1.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CRIM1_HUMAN | 28.5 % | 81.6 | 2.41E-16 |
| SPON1_HUMAN | 29.528 % | 88.2 | 1.79E-18 |