- EST 'AHC0AAA230YL20_RM1' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R234...' >
- Transcript 'KH2012:KH.C7.730.v1....' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1497.g08442.01.t
Possible name(s)
ABCF1; ABCF2; ABCF3
Gene model
Location
S1497 [8,624 / 14,411]
Amino acid sequence
Length: 729
>Haaura.CG.MTP2014.S1497.g08442.01.p
TVNFKLETEKMPSEAAKRRALKKKEASKKKPTKKTTENGTENGTETNGAGNGELLPELQM
QDLSINSRSCTGVLASHPLATDIHIHNFSCTFHGQVLFEDTNLELNSGNRYGFIGMNGCG
KTTMLRCLGHREIPIPEHIDIFLLDRELEGSDKTPLETVMEVDQERLKLEKEAERLMHED
PESPHLFHIYERLDEIGADVAEVRAGRILHGLGFTAAMQQKKLSDFSGGWRMRVALARAL
FVKPYLLLLDEPTNHLDLDACVWLEEELKNFKHILVLISHSQDFLNGVCTNIIHMKDKKL
QNYTGNYDAFIRTKGELEENQMKRYKWEQDQISHMKDYIAKFGHGSAKLARQAQSKEKTL
AKMVDKGLTRKVLSDCTLSFFFPDCGKLAPPVLMVQKVSFRYNENTPWIYKDLEFGVDLD
TRLALVGPNGAGKSTLLKLIAGELVPSDGLIRRHSHLKIARYHQHLADHLDVDLSPLDYM
MKCYPHMRDIETVRKVIGRYGLTGKQQVCPIKNLSDGQICRVVFAWLSYQNPHLLLLDEP
TNHLDIETIDALAEAIVEFNGGMILVSHDFRLISQVAKNIWVCENQTATPWEGDILAYKE
SLKKRVLKEDKSLTKGKSADHQRVEVSKKKFPALKVNPNQKSSNMIMGIVPAKKPSKGQK
AATNGTNAKGLGKMYRMGNRSFMDIFRNLFISVFLSYCIRSYSCDVTFKFTFLCIYYFAI
AVFVPVEF*
Nucleotide sequence
Length: 2,187
>Haaura.CG.MTP2014.S1497.g08442.01.t
ACCGTAAATTTTAAACTTGAAACTGAGAAAATGCCTTCAGAAGCAGCTAAAAGACGAGCA
TTGAAGAAAAAAGAAGCTTCAAAAAAGAAGCCAACTAAGAAAACTACAGAAAATGGAACT
GAAAATGGAACTGAAACAAATGGAGCTGGAAATGGAGAACTTTTGCCTGAACTGCAGATG
CAGGACCTGTCAATTAATTCACGCTCATGCACTGGTGTACTTGCTTCTCATCCTCTTGCT
ACTGACATCCATATTCATAATTTTTCTTGCACTTTCCACGGACAGGTTCTTTTCGAAGAC
ACTAATTTGGAATTGAATTCTGGAAATAGATATGGATTTATTGGCATGAATGGTTGTGGT
AAAACCACCATGCTGAGATGTCTCGGACATAGAGAAATCCCCATCCCTGAACATATTGAC
ATCTTTCTCTTGGACAGAGAATTAGAGGGGAGTGATAAAACTCCACTCGAAACTGTAATG
GAAGTCGATCAAGAACGTTTGAAGTTGGAGAAAGAGGCTGAGCGTTTGATGCATGAAGAT
CCCGAAAGCCCGCACTTATTCCACATCTATGAACGTCTTGACGAGATTGGAGCTGATGTC
GCTGAAGTCAGAGCGGGAAGAATTTTGCATGGATTGGGATTTACTGCGGCGATGCAGCAG
AAAAAGTTGTCTGATTTTTCTGGTGGATGGCGGATGAGAGTTGCCTTGGCAAGAGCTCTG
TTTGTAAAGCCATACCTTCTGCTATTGGATGAGCCTACTAATCATCTCGATTTGGATGCA
TGCGTCTGGTTGGAAGAAGAACTCAAAAATTTCAAACACATTCTGGTTTTGATATCTCAT
TCGCAAGATTTTCTCAATGGCGTTTGTACCAACATCATTCACATGAAAGATAAAAAGTTA
CAAAACTATACGGGTAACTATGATGCGTTCATACGTACAAAAGGAGAGCTGGAAGAAAAC
CAAATGAAAAGATACAAATGGGAACAAGATCAAATCTCGCATATGAAGGATTACATTGCT
AAATTCGGTCACGGCAGTGCGAAATTAGCAAGACAGGCACAGAGTAAAGAAAAAACGCTG
GCAAAGATGGTTGATAAAGGACTCACCCGGAAGGTTCTTTCTGACTGCACACTCTCTTTT
TTCTTCCCGGACTGTGGTAAACTCGCCCCACCTGTTCTGATGGTACAGAAAGTCAGTTTT
CGATACAACGAAAACACGCCTTGGATCTACAAGGATTTGGAATTCGGAGTAGATTTGGAT
ACAAGATTAGCGTTAGTGGGACCAAATGGAGCAGGAAAATCAACTTTACTCAAGCTGATT
GCTGGCGAGCTTGTACCCTCGGATGGATTGATTCGTCGCCACAGTCATTTGAAGATAGCT
CGTTATCATCAGCATTTAGCAGACCATTTAGACGTTGACCTTTCTCCATTGGACTACATG
ATGAAATGTTACCCTCATATGAGAGATATTGAAACAGTGAGGAAAGTTATAGGAAGATAT
GGGCTGACAGGGAAACAACAGGTTTGTCCCATCAAAAATCTGTCTGATGGTCAAATTTGT
CGTGTGGTTTTTGCTTGGTTGTCGTATCAAAATCCTCATTTGCTGCTGCTTGACGAACCT
ACTAACCATCTTGATATCGAGACCATAGATGCTTTGGCAGAGGCGATTGTTGAATTCAAT
GGTGGAATGATATTGGTGTCTCACGACTTCAGGCTCATAAGTCAGGTAGCAAAAAATATT
TGGGTTTGTGAAAATCAAACTGCCACACCCTGGGAAGGAGATATTTTGGCTTACAAGGAA
TCCCTGAAGAAACGTGTGCTGAAGGAAGATAAAAGTCTTACCAAGGGAAAGAGCGCGGAT
CATCAGAGAGTGGAAGTTTCCAAAAAAAAATTCCCAGCGCTAAAGGTGAACCCAAACCAA
AAATCATCCAACATGATTATGGGAATCGTTCCTGCTAAAAAGCCTTCCAAAGGTCAGAAA
GCGGCAACTAATGGGACCAATGCAAAAGGATTAGGAAAAATGTATAGAATGGGCAATAGA
AGTTTTATGGATATTTTTAGGAACCTATTTATTTCAGTCTTTCTCTCGTACTGCATCAGA
TCATACTCCTGTGACGTTACTTTTAAGTTCACATTTTTGTGTATTTATTATTTTGCCATA
GCAGTATTTGTTCCAGTGGAGTTTTGA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[75-319] 8.74E-41 - T[378-587] 2.99E-40 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[83-322] 14.246 - T[393-610] 13.739 |
| Pfam |
ABC_transporter-like (IPR003439) - T[99-254] 2.2E-21 - T[411-542] 9.8E-20 |
| SMART |
AAA+_ATPase (IPR003593) - T[107-306] 3.1E-9 - T[419-587] 1.1E-7 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[226-240] . |
| Pfam |
ABC_tran_Xtn (IPR032781) - T[293-364] 1.2E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCF2_HUMAN | 68.614 % | 851 | 0 |
| ABCF3_HUMAN | 40.858 % | 415 | 2.9E-135 |
| ABCF1_HUMAN | 39.502 % | 361 | 5.13E-113 |