Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1522.g08495.01.t

Possible name(s)

LRMDA; LRRC6; LRRC72

Gene model

Haaura.CG.MTP2014.S1522.g08495

Location

S1522 [18,461 / 19,127]

Sequences

Amino acid sequence

Length: 222

>Haaura.CG.MTP2014.S1522.g08495.01.p
MESDYEDVKLTGESDESVVVGDELSYTEKDCDSVPSFLSQYAERIRRLNLSYNMLTNIDE
VANFEMLIELNLDNNLIDENTEFPSLPMLQTLTVTKNKIVDCKKFVDQMKQYRNLTYLSV
LGNTACPNPLLGGSEEEYQTFRELVISELPQLKFLDFRPVTKEERMNKTQAVDEGTEVYS
DETPSPDFDDSKPRWAGVGRVRYSYVGKKSEGNRFIRNNDL*

Nucleotide sequence

Length: 666

>Haaura.CG.MTP2014.S1522.g08495.01.t
ATGGAAAGCGATTACGAAGATGTAAAATTAACAGGAGAATCAGACGAAAGTGTAGTCGTG
GGAGACGAATTGTCCTATACTGAGAAGGACTGCGACAGCGTCCCGTCGTTTTTGTCCCAG
TACGCAGAACGTATAAGGCGATTAAATTTGAGTTATAACATGTTGACGAACATAGACGAG
GTCGCCAACTTTGAAATGCTTATAGAATTGAACCTGGACAACAATTTAATTGACGAAAAT
ACAGAATTCCCTTCGTTACCAATGTTACAAACACTAACCGTTACTAAAAATAAAATAGTC
GACTGCAAGAAATTTGTTGACCAAATGAAGCAATACAGAAATCTGACCTACTTGAGCGTA
CTTGGAAACACAGCCTGCCCCAACCCCCTACTCGGAGGCAGCGAAGAAGAATATCAAACG
TTCAGAGAGCTAGTGATTTCCGAACTTCCGCAGCTCAAATTTTTGGATTTTAGGCCCGTG
ACGAAAGAAGAGCGAATGAACAAAACGCAAGCAGTGGACGAAGGAACAGAAGTTTACTCG
GACGAAACTCCTTCGCCTGATTTTGATGATTCCAAGCCTCGATGGGCAGGAGTTGGAAGG
GTACGGTACAGTTACGTGGGAAAAAAATCAGAAGGAAATCGATTTATTCGAAACAATGAC
TTGTGA

InterProScan

Gene3D	LRR_dom_sf (IPR032675) - T[16-180] 6.7E-26
ProSiteProfiles	Leu-rich_rpt (IPR001611) - T[44-65] 7.073 - T[66-87] 6.749

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LRMDA_HUMAN	39.175 %	115	3.61E-32