Aniseed - Transcript Card

Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1535.g08514.01.t

Possible name(s)

RPS8

Gene model

Haaura.CG.MTP2014.S1535.g08514

Location

S1535 [14,728 / 16,059]

Sequences

Amino acid sequence

Length: 209

>Haaura.CG.MTP2014.S1535.g08514.01.p
MGISRDSWHKRRKTGGKRPQPHKKRKFELGRPAANTKIGDKRVHMVRTRGGNKKFRALRL
DSGNFSWGSEACTRKTRIIDVMYNASNNELVRTKTLVKNCIVLIDCTPFRQWYESHYMLP
LSRKKGAKPSEAEEAVLNKKLSNKTQKKYEERKKIAKVATSIEEQFTQGRILACVASRPG
QSGRCDGYILEGKELEFYHKKIKAKKGK*

Nucleotide sequence

Length: 627

>Haaura.CG.MTP2014.S1535.g08514.01.t
ATGGGTATATCCAGAGATTCATGGCATAAGAGGCGTAAAACCGGGGGTAAGCGGCCCCAG
CCCCACAAAAAAAGGAAATTTGAATTAGGTAGACCGGCTGCCAATACAAAAATAGGGGAT
AAAAGGGTTCATATGGTGCGGACTCGCGGAGGTAATAAAAAATTCCGAGCACTTCGTCTT
GACAGTGGAAATTTCTCATGGGGTTCGGAGGCTTGTACGCGCAAGACACGTATCATCGAT
GTGATGTACAATGCAAGTAACAACGAACTTGTGCGTACAAAAACCCTGGTCAAAAACTGC
ATTGTTCTTATTGACTGCACGCCTTTCAGACAGTGGTACGAGTCTCACTACATGTTACCA
TTGTCTCGTAAGAAGGGAGCCAAGCCGTCTGAAGCAGAGGAAGCTGTGTTGAATAAGAAA
TTGTCAAACAAAACGCAGAAAAAGTACGAAGAGAGGAAGAAAATTGCCAAGGTTGCTACT
TCTATTGAAGAACAGTTCACACAGGGTCGTATTCTAGCCTGCGTCGCTTCTCGACCTGGA
CAATCTGGTAGATGTGATGGATATATCTTGGAGGGTAAGGAGTTGGAATTCTACCACAAA
AAGATCAAGGCAAAGAAAGGAAAGTAA

InterProScan

PANTHER	Ribosomal_S8e (IPR001047) - T[1-206] 3.0E-109
TIGRFAM	Ribosomal_S8e (IPR001047) - T[1-192] 3.1E-47
Pfam	Ribosomal_S8e/biogenesis_NSA2 (IPR022309) - T[1-190] 2.1E-61
ProSitePatterns	Ribosomal_S8e_CS (IPR018283) - T[11-30] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS8_HUMAN	78.846 %	330	6.83E-117