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TRANSCRIPT CARD

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  1. Clone 'cima877199' > 
  2. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  3. Transcript 'Cisavi.CG.ENS81.R30....' > 
  4. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S154.g02746.01.t

Possible name(s)

EXOSC1

Gene model

Haaura.CG.MTP2014.S154.g02746

Location

S154 [644 / 2,042]

Sequences

Amino acid sequence

Length: 229

>Haaura.CG.MTP2014.S154.g02746.01.p
FFSLMCHLFNPDNAVILLNYISTFIFHTIFIVVNTEHQICIPGERLASVESCQAGFGTYV
RHGYIFASLAGILQRDIKSGLPTLSIKSKHPKERLPKIDTIVTCKITSISTRFAKCQIIA
VDNVTISESFRGMIRKEDVRAKEIDKVEISKSFRPGDIVLAKVLSLGDASFYLLTTAENE
LGVVIARSEAGELMLPINWQEMQCPVSFVKEYRKVARPQKEYLEIPER*

Nucleotide sequence

Length: 687

>Haaura.CG.MTP2014.S154.g02746.01.t
TTTTTTTCTTTGATGTGTCATTTGTTCAATCCAGATAATGCCGTTATTTTGCTGAATTAT
ATCTCTACATTCATTTTTCATACTATTTTCATTGTTGTAAATACAGAACATCAGATATGC
ATTCCAGGTGAACGCTTAGCGAGCGTGGAATCCTGCCAAGCCGGATTCGGAACTTATGTC
AGACACGGATACATATTTGCATCCCTCGCGGGTATCCTTCAGCGTGACATTAAATCAGGA
CTGCCTACTCTATCCATAAAGTCTAAGCATCCCAAAGAAAGATTACCTAAAATCGATACC
ATCGTAACTTGCAAGATAACTTCAATAAGTACAAGATTTGCAAAGTGTCAAATAATCGCT
GTTGACAACGTAACAATCTCCGAGTCTTTTCGTGGAATGATTCGAAAAGAAGATGTAAGA
GCGAAGGAAATTGACAAAGTGGAAATTTCAAAGAGTTTTCGACCCGGAGATATAGTTTTG
GCCAAAGTTCTATCTCTCGGAGACGCATCTTTTTATCTGCTTACAACGGCGGAAAATGAA
CTCGGCGTTGTCATTGCAAGAAGCGAGGCAGGAGAACTTATGTTGCCGATAAACTGGCAA
GAAATGCAGTGTCCCGTGTCTTTCGTGAAAGAGTATCGTAAAGTCGCAAGGCCACAGAAA
GAGTATCTTGAAATACCAGAACGATAA

InterProScan

Pfam
Exosome_cplx_N_dom (IPR025721) - T[39-75] 5.8E-12
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[95-215] 3.18E-35
Pfam
EXOSC1 (IPR019495) - T[126-166] 1.5E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOS1_HUMAN 61.497 % 228 3.88E-76