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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S1815.1.v1...' > 
  2. Transcript 'Boleac.CG.SB_v3.S155...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'Haaura.CG.MTP2014.S4...' > 
  5. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S154.g02746.02.t

Possible name(s)

EXOSC1

Gene model

Haaura.CG.MTP2014.S154.g02746

Location

S154 [774 / 2,042]

Sequences

Amino acid sequence

Length: 205

>Haaura.CG.MTP2014.S154.g02746.02.p
TDCIIMSESIAEHQICIPGERLASVESCQAGFGTYVRHGYIFASLAGILQRDIKSGLPTL
SIKSKHPKERLPKIDTIVTCKITSISTRFAKCQIIAVDNVTISESFRGMIRKEDVRAKEI
DKVEISKSFRPGDIVLAKVLSLGDASFYLLTTAENELGVVIARSEAGELMLPINWQEMQC
PVSFVKEYRKVARPQKEYLEIPER*

Nucleotide sequence

Length: 615

>Haaura.CG.MTP2014.S154.g02746.02.t
ACGGATTGCATTATCATGTCTGAATCCATAGCAGAACATCAGATATGCATTCCAGGTGAA
CGCTTAGCGAGCGTGGAATCCTGCCAAGCCGGATTCGGAACTTATGTCAGACACGGATAC
ATATTTGCATCCCTCGCGGGTATCCTTCAGCGTGACATTAAATCAGGACTGCCTACTCTA
TCCATAAAGTCTAAGCATCCCAAAGAAAGATTACCTAAAATCGATACCATCGTAACTTGC
AAGATAACTTCAATAAGTACAAGATTTGCAAAGTGTCAAATAATCGCTGTTGACAACGTA
ACAATCTCCGAGTCTTTTCGTGGAATGATTCGAAAAGAAGATGTAAGAGCGAAGGAAATT
GACAAAGTGGAAATTTCAAAGAGTTTTCGACCCGGAGATATAGTTTTGGCCAAAGTTCTA
TCTCTCGGAGACGCATCTTTTTATCTGCTTACAACGGCGGAAAATGAACTCGGCGTTGTC
ATTGCAAGAAGCGAGGCAGGAGAACTTATGTTGCCGATAAACTGGCAAGAAATGCAGTGT
CCCGTGTCTTTCGTGAAAGAGTATCGTAAAGTCGCAAGGCCACAGAAAGAGTATCTTGAA
ATACCAGAACGATAA

InterProScan

Pfam
Exosome_cplx_N_dom (IPR025721) - T[15-51] 4.9E-12
SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[71-191] 2.33E-35
Pfam
EXOSC1 (IPR019495) - T[102-142] 1.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EXOS1_HUMAN 61.497 % 228 1.05E-76