Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S155.g02765.01.t

Possible name(s)

BCKDHB; PDHB; TKTL1

Gene model

Haaura.CG.MTP2014.S155.g02765

Location

S155 [2,500 / 3,939]

Sequences

Amino acid sequence

Length: 401

>Haaura.CG.MTP2014.S155.g02765.01.p
MLNSSLCRSLVLRNNVKRMYNVGFKRSAHFTFLPDGAKSELGETKKMNMFQSLTNAMDTI
LETDPTALIFGEDVAFGGVFRCTVGLADKYGSQRVFNTPLCEQGIVGFGIGLACAGATAI
AEIQFADYIFPAFDQIVNEAAKYRYRSGGLFECGKLTIRAPCSAVGHGALYHSQTPEAYF
SHTPGIKVVIPRSPIQAKGLLMACIRDPNPCIFLEPKVLYRAAEEEVPVCDYTLPLSKAE
VLKEGNDLTLVGYGTQIHVLKEVAQMAEEKLGVSCEVIDVVTILPWDSDTICKSVEKTGR
LLISHEAPITGGFAAEVASTVLKECFLNLECPIERVCGYDTPFPHIFEPFYLPDKWRCFE
AFHYVISIPKVTINSCKVFLALIMFQSDPTHQLWPRVCAR*

Nucleotide sequence

Length: 1,275

>Haaura.CG.MTP2014.S155.g02765.01.t
ATGCTGAACTCTAGTCTATGTCGGTCTTTGGTTCTCAGGAACAACGTTAAACGCATGTAC
AATGTAGGTTTCAAAAGATCTGCACATTTCACTTTCCTGCCTGACGGAGCGAAGAGTGAG
CTCGGCGAAACGAAGAAAATGAACATGTTCCAATCACTGACAAATGCTATGGATACCATA
CTCGAAACTGACCCTACGGCCTTGATCTTCGGGGAGGACGTTGCCTTTGGTGGTGTGTTT
CGATGCACAGTTGGGTTGGCAGATAAATATGGTAGTCAGCGTGTTTTCAACACCCCTCTG
TGTGAGCAAGGCATCGTTGGTTTCGGCATAGGTCTAGCATGTGCTGGAGCAACTGCAATT
GCCGAAATACAGTTCGCAGACTATATATTCCCTGCATTTGACCAGATCGTCAATGAGGCA
GCAAAGTACAGATACAGGTCAGGCGGACTCTTTGAGTGTGGCAAGCTAACGATTCGGGCA
CCTTGTAGTGCTGTGGGTCATGGGGCTCTTTATCATTCTCAAACGCCAGAAGCATATTTC
TCCCACACACCTGGGATCAAAGTTGTCATACCACGAAGTCCCATACAAGCCAAGGGTCTT
TTAATGGCATGCATCAGGGATCCGAACCCCTGCATCTTTTTAGAGCCAAAAGTTCTTTAC
AGAGCAGCCGAAGAAGAAGTGCCAGTATGTGATTATACTCTGCCGTTGTCCAAAGCAGAG
GTTTTAAAGGAAGGTAATGATCTCACACTGGTGGGATACGGAACTCAAATTCATGTACTA
AAAGAAGTGGCGCAGATGGCCGAAGAAAAACTAGGGGTATCGTGTGAAGTAATTGACGTG
GTAACTATACTTCCATGGGACAGTGACACCATATGCAAGTCTGTAGAGAAAACAGGACGC
CTGCTTATCAGCCACGAAGCCCCAATAACAGGGGGATTCGCTGCAGAAGTCGCCTCAACA
GTCCTGAAAGAATGCTTCCTAAATTTGGAATGCCCTATAGAAAGGGTGTGTGGGTACGAC
ACTCCGTTTCCTCACATATTCGAACCGTTTTATTTGCCGGACAAATGGAGATGTTTCGAG
GCATTCCACTATGTAATCTCCATCCCCAAAGTGACAATAAACAGTTGTAAGGTATTCCTA
GCACTTATAATGTTCCAATCAGACCCCACACATCAGCTCTGGCCCAGAGTGTGTGCTAGA
TGAATTTTATCATGCCTCATACACTGAATTATTGAATGTTTGTTTCATTGCACTGGTGTT
GACTTTGTAGTTTAC

InterProScan

SUPERFAMILY	THDP-binding (IPR029061) - T[33-227] 1.71E-65
Pfam	Transketolase-like_Pyr-bd (IPR005475) - T[46-221] 2.9E-43
SMART	Transketolase-like_Pyr-bd (IPR005475) - T[47-222] 9.8E-62
SUPERFAMILY	Transketo_C/PFOR_II (IPR009014) - T[231-363] 3.14E-38
Pfam	Transketolase_C (IPR033248) - T[238-356] 2.9E-33
Gene3D	Transketo_C/PFOR_II (IPR009014) - T[240-363] 5.7E-50

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ODPB_HUMAN	35.127 %	181	1.28E-53
ODBB_HUMAN	75.51 %	561	0