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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.26.v5.A...' > 
  2. Clone 'cima89820' > 
  3. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S157.g02787.01.t

Possible name(s)

AC018523.2; PSMA1; PSMA8

Gene model

Haaura.CG.MTP2014.S157.g02787

Location

S157 [38,140 / 40,264]

Sequences

Amino acid sequence

Length: 310

>Haaura.CG.MTP2014.S157.g02787.01.p
FRNQYDNDVTVWSPQGRIHQVEYAMEAVKQGSATVGLKSKNHAVLVALKRAQSDLTAHQK
KLLRIAPHVAIGIAGLTADGRSLGNFMRKECLHSDFVFERRLPISRLVNAVGNKTQAPTQ
RYGRRPVGVGILVAGYDDQGPHIYQTCPSANFYNCKAMAIGSRSQSARTYLERNCKKFLD
CSVDELVNHGLLALRETLPSEQELSISNCSVAIVGKAQDVVIYEDEQVEPFLTRIEETKA
AVVAADVPMQQDQEIGQGELSGLVPPVNQNTLQQKSQSRQTQLHIQHVKSSIILKKVKDV
LHCTGKSEA*

Nucleotide sequence

Length: 930

>Haaura.CG.MTP2014.S157.g02787.01.t
TTTCGTAATCAGTACGATAACGATGTCACTGTATGGAGTCCGCAAGGACGAATTCATCAG
GTTGAATATGCCATGGAAGCTGTCAAACAAGGGTCTGCAACAGTTGGTTTGAAATCTAAG
AACCATGCTGTATTAGTAGCTCTGAAGAGAGCGCAGTCAGATTTAACAGCCCATCAGAAA
AAATTGCTTCGTATAGCTCCTCATGTTGCAATCGGTATCGCGGGACTAACAGCTGACGGA
AGGTCGCTTGGAAATTTCATGAGAAAAGAATGTCTTCATTCTGACTTTGTGTTCGAAAGA
CGTTTGCCTATTTCAAGATTAGTTAACGCTGTCGGAAATAAAACCCAAGCTCCTACCCAG
AGATATGGTCGGCGTCCTGTTGGTGTAGGAATTTTAGTGGCTGGATATGATGATCAAGGA
CCTCATATTTATCAAACCTGCCCATCAGCTAATTTCTATAACTGCAAAGCAATGGCAATA
GGTTCAAGGTCTCAGAGTGCAAGAACGTACTTGGAACGGAACTGCAAGAAGTTTCTTGAC
TGTTCTGTTGATGAGCTTGTAAATCATGGACTGTTAGCATTAAGAGAAACTCTTCCCAGC
GAACAAGAGTTGTCAATAAGCAACTGTTCCGTAGCCATCGTCGGTAAAGCTCAGGACGTT
GTAATATACGAAGACGAGCAGGTAGAGCCGTTCCTAACGAGGATTGAAGAAACTAAAGCG
GCTGTGGTGGCAGCAGATGTGCCCATGCAACAAGATCAAGAAATTGGACAAGGAGAACTT
TCTGGCTTAGTGCCTCCGGTCAATCAAAACACTTTACAACAAAAAAGTCAATCCAGACAG
ACACAGCTACATATTCAACATGTCAAATCTAGCATAATATTAAAGAAAGTTAAAGATGTA
TTGCACTGTACAGGAAAATCAGAAGCATGA

InterProScan

Gene3D
Ntn_hydrolases_N (IPR029055) - T[1-237] 4.6E-81
PANTHER
Proteasome_alpha1 (IPR035144) - T[2-246] 1.7E-111
SUPERFAMILY
Ntn_hydrolases_N (IPR029055) - T[3-238] 1.53E-70
Pfam
Proteasome_asu_N (IPR000426) - T[5-27] 2.6E-13
ProSitePatterns
Proteasome_asu_N (IPR000426) - T[5-27] .
CDD
Proteasome_alpha1 (IPR035144) - T[5-215] 8.38922E-135
SMART
Proteasome_asu_N (IPR000426) - T[5-27] 8.2E-10
ProSiteProfiles
Proteasome_alpha-type (IPR023332) - T[20-232] 65.596
Pfam
Proteasome_sua/b (IPR001353) - T[28-214] 4.9E-50

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSMA8_HUMAN 33.333 % 129 6.56E-36
PSA5_HUMAN 29.796 % 125 1.65E-34
PSA1_HUMAN 71.308 % 374 1.68E-131