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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S81...' > 
  2. Transcript 'KH2012:KH.L134.14.v1...' > 
  3. Transcript 'Harore.CG.MTP2014.S2...' > 
  4. Transcript 'Phmamm.CG.MTP2014.S7...' > 
  5. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1622.g08653.01.t

Possible name(s)

MUC4; PPP2R1B; SF3B1

Gene model

Haaura.CG.MTP2014.S1622.g08653

Location

S1622 [12,082 / 20,015]

Sequences

Amino acid sequence

Length: 1,136

>Haaura.CG.MTP2014.S1622.g08653.01.p
RWDATPTPAADAPKKRMTWDQADTGAPTPSVQRWDETPGRSKGGETPGGMATPGQSTRMW
DSTPSHVSSGAVTPGHATPGVGGTPSARKNRWDETPKTERETPGRSMGWAETPKVDRGDE
SERIPGGTSKRKSRWDLTPAAATPGNQTPGSATPVFTPGGTPSSFTPKSGMGTPGTIGTP
SLFTPSGVTPIGAKAMGMPTPSPGQLMSMTPEQLQAWRWEREIDERNRPLADEELDTMFP
EGYKVLAPPTGYIPIRTPARKITATPTPMSGASGFHIQVEDKSMKGMTDQPTGNLPFLKP
DDIQYFDKLLVDVDEDTLSPEEQKERKIMKLLLKIKNGTPPMRKSALRQITDKSREFGAG
PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYA
RVEGREIISNLAKAAGLATMISVMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLK
AVCRSKKSWQARHTGIKITQQIAILMGCAILPHLRNLVEIIEHGLEDEQQKVRTITALAL
AALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREV
MLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPKYIKNEILPPFFKHFWNQRMALDRRN
YRQLVDTTVEIANKVGAAEMVQRIVDDLKDENEQYRKMVMETIDKILVNLGAADIDHRLE
EQLIDGILYAFQEQTQEDIVMLNGFGTVVNTLGKRVKPYLPQICGTVLWRLNNKAAKVRQ
QAADLISRISVVMRTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMHKM
TPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVGAREWMRICFELLELLKAH
KKSIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVL
PALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVCTLLEDALMERDLVHRQIAS
AAIGHMSLGVYGFGCEDALNHILNYVWPNIFETSPHVIQAVMSAIDGMRIALGPCRLLQY
CLQGLFHPARKVRDVYWKVYNSIYIGAQDSLVPSYPRFYNDDKNQYLRYELDYVL*

Nucleotide sequence

Length: 3,408

>Haaura.CG.MTP2014.S1622.g08653.01.t
AGATGGGACGCAACACCTACTCCTGCAGCAGATGCCCCGAAGAAACGAATGACGTGGGAC
CAAGCTGATACCGGTGCCCCGACTCCGAGTGTCCAGCGATGGGATGAAACACCAGGCAGA
TCAAAGGGAGGAGAAACTCCTGGTGGTATGGCAACTCCAGGACAAAGTACCAGAATGTGG
GACTCAACACCAAGTCACGTTAGTTCTGGAGCAGTGACACCCGGACATGCTACTCCTGGA
GTCGGGGGTACACCCAGTGCTCGTAAAAACAGATGGGACGAGACACCCAAGACAGAAAGA
GAAACTCCCGGCAGATCAATGGGTTGGGCAGAGACCCCAAAAGTTGACAGAGGGGATGAA
AGTGAGAGAATTCCTGGTGGCACAAGCAAAAGAAAATCTAGATGGGACTTAACCCCTGCT
GCAGCCACGCCCGGAAACCAAACCCCAGGGAGTGCGACACCTGTGTTTACTCCTGGTGGC
ACCCCGTCCTCTTTCACCCCAAAATCTGGCATGGGTACCCCCGGGACTATCGGAACACCT
TCTCTTTTCACCCCTTCTGGTGTCACCCCGATCGGGGCCAAGGCTATGGGTATGCCGACT
CCTTCACCGGGCCAACTGATGTCAATGACCCCTGAACAACTTCAAGCATGGAGATGGGAA
CGTGAAATTGATGAACGTAACCGCCCACTAGCGGATGAAGAACTAGATACCATGTTTCCA
GAAGGTTACAAAGTTCTAGCGCCCCCTACTGGATACATTCCAATTCGTACGCCGGCTCGT
AAAATCACAGCGACCCCCACACCAATGTCTGGGGCTAGTGGGTTTCACATTCAAGTAGAG
GACAAGTCTATGAAAGGCATGACTGATCAACCAACAGGAAATCTTCCATTTCTGAAGCCG
GATGACATTCAGTATTTTGACAAATTGCTTGTGGATGTGGACGAGGATACTCTGAGCCCT
GAAGAACAAAAAGAACGGAAGATAATGAAACTGCTGTTAAAAATTAAAAACGGAACTCCC
CCTATGAGGAAGAGTGCTCTGAGACAGATCACAGACAAGTCACGAGAGTTTGGCGCGGGT
CCTCTGTTCAATCAAATCCTTCCTCTTCTCATGTCTCCAACACTAGAAGATCAAGAACGC
CATCTTCTTGTTAAGGTAATTGATCGCATTCTGTACAAACTCGACGACCTGGTTCGTCCG
TACGTTCACAAGATCCTCGTTGTCATTGAACCCTTGCTCATTGACGAAGATTATTACGCC
AGGGTTGAAGGTCGTGAAATCATTTCGAATCTGGCAAAAGCAGCGGGACTTGCAACCATG
ATTTCTGTCATGAGACCTGATATTGATAACATGGATGAGTACGTCCGTAACACAACTGCA
AGAGCATTCGCTGTAGTTGCATCTGCACTAGGAATTCCATCTCTGCTTCCTTTCTTGAAA
GCCGTTTGCAGAAGCAAGAAATCTTGGCAGGCTCGTCACACTGGTATCAAGATCACCCAA
CAGATCGCCATCCTCATGGGATGTGCTATACTTCCTCACTTGAGAAATTTGGTTGAGATT
ATTGAACACGGTCTGGAGGATGAACAACAGAAAGTCAGAACAATCACTGCTCTTGCTTTG
GCTGCGTTGGCAGAAGCCGCCACACCTTATGGTATCGAGTCCTTTGACAGTGTATTGAAA
CCTTTATGGAAAGGTATCAGAACCCATAGAGGTAAAGGTTTGGCTGCGTTTTTGAAAGCC
ATCGGCTATCTCATTCCACTTATGGATGCCGAATATGCCAACTATTACACTCGTGAAGTC
ATGTTGATTCTGATCCGAGAGTTTCAGTCTCCTGACGAAGAAATGAAGAAGATTGTTTTG
AAGGTTGTCAAGCAATGTTGTGCCACTGATGGTGTCGAACCCAAGTACATCAAAAACGAG
ATTCTTCCTCCATTTTTCAAGCATTTCTGGAACCAGAGGATGGCACTGGATCGTCGTAAC
TACAGGCAACTTGTCGACACTACGGTTGAGATTGCGAATAAGGTTGGTGCAGCTGAAATG
GTTCAAAGAATAGTGGATGACCTTAAGGATGAGAATGAACAGTATCGTAAGATGGTTATG
GAAACAATCGATAAAATCTTGGTTAATCTTGGTGCTGCTGATATTGATCACAGACTGGAA
GAACAGCTTATCGATGGTATACTCTATGCATTTCAAGAACAGACCCAAGAAGACATCGTT
ATGCTGAACGGTTTTGGAACGGTGGTCAATACCCTTGGTAAAAGAGTGAAACCCTATCTT
CCTCAGATTTGTGGTACGGTTCTCTGGCGTCTCAATAACAAAGCCGCGAAGGTTCGTCAG
CAAGCAGCCGACCTTATCTCCAGGATCTCTGTCGTCATGCGAACGTGCCAAGAGGAAAAA
CTCATGGGTCATCTCGGTGTCGTTCTGTACGAATACCTGGGTGAAGAATATCCAGAGGTT
TTGGGTTCAATATTAGGGGCGCTCAAGTCTATTGTCAATGTAATAGGTATGCACAAGATG
ACTCCTCCCATCAAAGATCTTCTTCCTCGTCTGACTCCGATTCTCAAGAATCGTCACGAG
AAGGTTCAGGAGAATTGCATCGATCTTGTCGGTCGTATCGCAGATCGTGGTGCAGAATAT
GTCGGTGCAAGAGAATGGATGAGAATATGTTTTGAGTTGCTTGAATTACTGAAGGCTCAC
AAGAAATCAATTCGAAGAGCAACAGTCAACACCTTCGGATACATTGCCAAAGCCATCGGC
CCACATGACGTCCTCGCTACATTATTAAACAACTTGAAAGTGCAAGAGCGTCAAAATCGT
GTGTGCACAACTGTCGCTATAGCTATTGTCGCAGAGACTTGCTCCCCTTTCACTGTTTTG
CCAGCTCTTATGAATGAGTATCGAGTCCCAGAACTTAATGTGCAGAATGGAGTCTTGAAG
GCTCTTTCTTTCCTTTTTGAATACATTGGTGAAATGGGAAAAGATTACATTTATGCTGTG
TGCACACTTCTTGAAGATGCCCTAATGGAAAGAGATTTGGTCCACAGACAAATCGCATCT
GCAGCAATCGGTCATATGTCGCTCGGTGTGTACGGATTTGGCTGCGAGGACGCTCTCAAT
CACATTCTCAATTACGTCTGGCCGAACATATTCGAAACGTCACCGCACGTCATCCAAGCT
GTCATGTCGGCCATAGATGGAATGAGAATTGCTCTGGGACCGTGCAGACTTCTACAATAC
TGTCTTCAGGGATTGTTTCATCCCGCCAGGAAGGTAAGAGATGTGTATTGGAAAGTATAC
AACAGCATATACATCGGAGCGCAAGACAGTCTCGTTCCCTCCTATCCTCGTTTCTATAAC
GACGACAAGAATCAGTATCTACGCTATGAGCTCGACTATGTCCTCTAA

InterProScan

Pfam
SF3b_su1 (IPR015016) - T[128-282] 4.4E-42
Gene3D
ARM-like (IPR011989) - T[310-557] 1.2E-7 - T[592-1029] 1.3E-21
SUPERFAMILY
ARM-type_fold (IPR016024) - T[331-417] 1.79E-96 - T[453-932] 1.79E-96 - T[970-1128] 1.79E-96
ProSiteProfiles
HEAT_type_2 (IPR021133) - T[517-555] 8.663

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3B1_HUMAN 83.857 % 1949 0