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TRANSCRIPT CARD

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  1. Clone 'cieg042k11' > 
  2. Transcript 'KH2012:KH.C14.422.v1...' > 
  3. Transcript 'KH2012:KH.C2.216.v2....' > 
  4. Transcript 'KH2012:KH.S966.7.v1....' > 
  5. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1622.g08653.02.t

Possible name(s)

MUC4; PPP2R1B; SF3B1

Gene model

Haaura.CG.MTP2014.S1622.g08653

Location

S1622 [13,233 / 20,015]

Sequences

Amino acid sequence

Length: 1,077

>Haaura.CG.MTP2014.S1622.g08653.02.p
RWDATPTPAADAPKKRMTWDQADTGAPTPSVQRWDETPGRSKGGETPGGMATPGQSTRMW
DSTPSHVSSGAVTPGHATPGVGGTPSARKNRWDETPKTERETPGRSMGWAETPKVDRGDE
SERIPGGTSKRKSRWDLTPAAATPGNQTPGSATPVFTPGGTPSSFTPKSGMGTPGTIGTP
SLFTPSGVTPIGAKAMGMPTPSPGQLMSMTPEQLQAWRWEREIDERNRPLADEELDTMFP
EGYKVLAPPTGYIPIRTPARKITATPTPMSGASGFHIQVEDKSMKGMTDQPTGNLPFLKP
DDIQYFDKLLVDVDEDTLSPEEQKERKIMKLLLKIKNGTPPMRKSALRQITDKSREFGAG
PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYA
RVEGREIISNLAKAAGLATMISVMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLK
AVCRSKKSWQARHTGIKITQQIAILMGCAILPHLRNLVEIIEHGLEDEQQKVRTITALAL
AALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTREV
MLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPKYIKNEILPPFFKHFWNQRMALDRRN
YRQLVDTTVEIANKVGAAEMVQRIVDDLKDENEQYRKMVMETIDKILVNLGAADIDHRLE
EQLIDGILYAFQEQTQEDIVMLNGFGTVVNTLGKRVKPYLPQICGTVLWRLNNKAAKVRQ
QAADLISRISVVMRTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKSIVNVIGMHKM
TPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVGAREWMRICFELLELLKAH
KKSIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVL
PALMNEYRVPELNVQNGVLKALSFLFEYIGEMGKDYIYAVCTLLEDALMERDLVHRQIAS
AAIGHMSLGVYGFGCEDALNHILNYVWPNIFETSPHVIQVNTFPIFDSILIFLFTL*

Nucleotide sequence

Length: 3,231

>Haaura.CG.MTP2014.S1622.g08653.02.t
AGATGGGACGCAACACCTACTCCTGCAGCAGATGCCCCGAAGAAACGAATGACGTGGGAC
CAAGCTGATACCGGTGCCCCGACTCCGAGTGTCCAGCGATGGGATGAAACACCAGGCAGA
TCAAAGGGAGGAGAAACTCCTGGTGGTATGGCAACTCCAGGACAAAGTACCAGAATGTGG
GACTCAACACCAAGTCACGTTAGTTCTGGAGCAGTGACACCCGGACATGCTACTCCTGGA
GTCGGGGGTACACCCAGTGCTCGTAAAAACAGATGGGACGAGACACCCAAGACAGAAAGA
GAAACTCCCGGCAGATCAATGGGTTGGGCAGAGACCCCAAAAGTTGACAGAGGGGATGAA
AGTGAGAGAATTCCTGGTGGCACAAGCAAAAGAAAATCTAGATGGGACTTAACCCCTGCT
GCAGCCACGCCCGGAAACCAAACCCCAGGGAGTGCGACACCTGTGTTTACTCCTGGTGGC
ACCCCGTCCTCTTTCACCCCAAAATCTGGCATGGGTACCCCCGGGACTATCGGAACACCT
TCTCTTTTCACCCCTTCTGGTGTCACCCCGATCGGGGCCAAGGCTATGGGTATGCCGACT
CCTTCACCGGGCCAACTGATGTCAATGACCCCTGAACAACTTCAAGCATGGAGATGGGAA
CGTGAAATTGATGAACGTAACCGCCCACTAGCGGATGAAGAACTAGATACCATGTTTCCA
GAAGGTTACAAAGTTCTAGCGCCCCCTACTGGATACATTCCAATTCGTACGCCGGCTCGT
AAAATCACAGCGACCCCCACACCAATGTCTGGGGCTAGTGGGTTTCACATTCAAGTAGAG
GACAAGTCTATGAAAGGCATGACTGATCAACCAACAGGAAATCTTCCATTTCTGAAGCCG
GATGACATTCAGTATTTTGACAAATTGCTTGTGGATGTGGACGAGGATACTCTGAGCCCT
GAAGAACAAAAAGAACGGAAGATAATGAAACTGCTGTTAAAAATTAAAAACGGAACTCCC
CCTATGAGGAAGAGTGCTCTGAGACAGATCACAGACAAGTCACGAGAGTTTGGCGCGGGT
CCTCTGTTCAATCAAATCCTTCCTCTTCTCATGTCTCCAACACTAGAAGATCAAGAACGC
CATCTTCTTGTTAAGGTAATTGATCGCATTCTGTACAAACTCGACGACCTGGTTCGTCCG
TACGTTCACAAGATCCTCGTTGTCATTGAACCCTTGCTCATTGACGAAGATTATTACGCC
AGGGTTGAAGGTCGTGAAATCATTTCGAATCTGGCAAAAGCAGCGGGACTTGCAACCATG
ATTTCTGTCATGAGACCTGATATTGATAACATGGATGAGTACGTCCGTAACACAACTGCA
AGAGCATTCGCTGTAGTTGCATCTGCACTAGGAATTCCATCTCTGCTTCCTTTCTTGAAA
GCCGTTTGCAGAAGCAAGAAATCTTGGCAGGCTCGTCACACTGGTATCAAGATCACCCAA
CAGATCGCCATCCTCATGGGATGTGCTATACTTCCTCACTTGAGAAATTTGGTTGAGATT
ATTGAACACGGTCTGGAGGATGAACAACAGAAAGTCAGAACAATCACTGCTCTTGCTTTG
GCTGCGTTGGCAGAAGCCGCCACACCTTATGGTATCGAGTCCTTTGACAGTGTATTGAAA
CCTTTATGGAAAGGTATCAGAACCCATAGAGGTAAAGGTTTGGCTGCGTTTTTGAAAGCC
ATCGGCTATCTCATTCCACTTATGGATGCCGAATATGCCAACTATTACACTCGTGAAGTC
ATGTTGATTCTGATCCGAGAGTTTCAGTCTCCTGACGAAGAAATGAAGAAGATTGTTTTG
AAGGTTGTCAAGCAATGTTGTGCCACTGATGGTGTCGAACCCAAGTACATCAAAAACGAG
ATTCTTCCTCCATTTTTCAAGCATTTCTGGAACCAGAGGATGGCACTGGATCGTCGTAAC
TACAGGCAACTTGTCGACACTACGGTTGAGATTGCGAATAAGGTTGGTGCAGCTGAAATG
GTTCAAAGAATAGTGGATGACCTTAAGGATGAGAATGAACAGTATCGTAAGATGGTTATG
GAAACAATCGATAAAATCTTGGTTAATCTTGGTGCTGCTGATATTGATCACAGACTGGAA
GAACAGCTTATCGATGGTATACTCTATGCATTTCAAGAACAGACCCAAGAAGACATCGTT
ATGCTGAACGGTTTTGGAACGGTGGTCAATACCCTTGGTAAAAGAGTGAAACCCTATCTT
CCTCAGATTTGTGGTACGGTTCTCTGGCGTCTCAATAACAAAGCCGCGAAGGTTCGTCAG
CAAGCAGCCGACCTTATCTCCAGGATCTCTGTCGTCATGCGAACGTGCCAAGAGGAAAAA
CTCATGGGTCATCTCGGTGTCGTTCTGTACGAATACCTGGGTGAAGAATATCCAGAGGTT
TTGGGTTCAATATTAGGGGCGCTCAAGTCTATTGTCAATGTAATAGGTATGCACAAGATG
ACTCCTCCCATCAAAGATCTTCTTCCTCGTCTGACTCCGATTCTCAAGAATCGTCACGAG
AAGGTTCAGGAGAATTGCATCGATCTTGTCGGTCGTATCGCAGATCGTGGTGCAGAATAT
GTCGGTGCAAGAGAATGGATGAGAATATGTTTTGAGTTGCTTGAATTACTGAAGGCTCAC
AAGAAATCAATTCGAAGAGCAACAGTCAACACCTTCGGATACATTGCCAAAGCCATCGGC
CCACATGACGTCCTCGCTACATTATTAAACAACTTGAAAGTGCAAGAGCGTCAAAATCGT
GTGTGCACAACTGTCGCTATAGCTATTGTCGCAGAGACTTGCTCCCCTTTCACTGTTTTG
CCAGCTCTTATGAATGAGTATCGAGTCCCAGAACTTAATGTGCAGAATGGAGTCTTGAAG
GCTCTTTCTTTCCTTTTTGAATACATTGGTGAAATGGGAAAAGATTACATTTATGCTGTG
TGCACACTTCTTGAAGATGCCCTAATGGAAAGAGATTTGGTCCACAGACAAATCGCATCT
GCAGCAATCGGTCATATGTCGCTCGGTGTGTACGGATTTGGCTGCGAGGACGCTCTCAAT
CACATTCTCAATTACGTCTGGCCGAACATATTCGAAACGTCACCGCACGTCATCCAAGTA
AATACTTTTCCTATATTTGATTCAATTCTCATTTTTCTCTTTACTTTATGA

InterProScan

Pfam
SF3b_su1 (IPR015016) - T[128-282] 5.0E-42
Gene3D
ARM-like (IPR011989) - T[310-554] 1.1E-7 - T[609-1029] 1.4E-21
SUPERFAMILY
ARM-type_fold (IPR016024) - T[311-923] 2.54E-94 - T[893-1052] 1.32E-12
ProSiteProfiles
HEAT_type_2 (IPR021133) - T[517-555] 8.663

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3B1_HUMAN 84.299 % 1809 0