Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1636.g08670.01.t

Possible name(s)

TPM2; TPM3; TPM4

Gene model

Haaura.CG.MTP2014.S1636.g08670

Location

S1636 [14,773 / 16,651]

Sequences

Amino acid sequence

Length: 317

>Haaura.CG.MTP2014.S1636.g08670.01.p
VSIFDFDIHIISSISTAKCICLINQSTSKMEAIKKKMQMLKMDKENSMDRKEQAEVDRKN
VEVKFGGLEEELHTLEKRLKGTEDELSTHQEKLGQSNDSLEAAEKKASDAEQEVSDLNKK
ISGLEDELESAQEKLAMSLTKLEDAEKAADESERGRKVIENRSLKDQEKLQLQEVHLQEA
KDIAEDADRKYEEVARKLATVEGDLERGEERAELAESKSTELEEEMKNAANNLKSLEAAA
EKYASKEAIFADEVKTLSDRLKDSEDRAESAEKLVVELEKSIDDVEVYLILYFLSSDEVY
KQKMRMRNFNEDISTY*

Nucleotide sequence

Length: 951

>Haaura.CG.MTP2014.S1636.g08670.01.t
GTTAGCATATTCGACTTCGATATCCACATCATCTCTTCTATATCTACTGCAAAGTGCATC
TGCTTAATCAACCAATCAACCTCTAAAATGGAAGCTATCAAGAAGAAGATGCAAATGTTG
AAAATGGACAAAGAAAACTCCATGGACAGAAAAGAGCAAGCTGAAGTAGACAGAAAGAAC
GTGGAAGTGAAATTTGGTGGGCTCGAAGAAGAACTTCATACCCTTGAAAAGAGACTGAAA
GGAACAGAAGACGAACTCAGCACTCACCAAGAAAAACTAGGACAATCGAACGACTCTCTC
GAAGCAGCTGAAAAAAAGGCGTCTGATGCTGAACAAGAAGTATCTGATCTAAACAAGAAA
ATTTCCGGTCTCGAAGACGAACTTGAAAGCGCACAAGAAAAACTCGCGATGTCGCTCACT
AAGTTGGAAGATGCTGAAAAGGCCGCTGATGAAAGCGAGCGAGGACGCAAAGTCATTGAG
AACAGATCTCTCAAAGATCAAGAGAAATTGCAACTCCAGGAAGTTCATCTACAAGAGGCG
AAAGACATCGCTGAAGATGCCGACAGGAAATACGAAGAAGTTGCTCGCAAACTTGCTACG
GTTGAAGGAGATTTGGAACGAGGCGAAGAGCGAGCAGAACTTGCTGAGAGTAAATCAACT
GAACTCGAGGAAGAAATGAAAAACGCTGCAAACAATCTGAAATCTCTTGAAGCAGCTGCA
GAAAAGTACGCCTCGAAAGAAGCAATTTTCGCAGACGAAGTAAAAACGCTTTCAGACCGA
TTGAAAGATTCTGAAGATCGCGCTGAGTCTGCTGAAAAACTGGTTGTGGAATTGGAAAAA
AGCATTGATGACGTAGAAGTTTATCTCATTCTTTATTTTCTTTCTTCAGATGAAGTTTAC
AAGCAAAAAATGAGAATGAGAAATTTCAACGAAGACATCTCTACTTACTAG

InterProScan

Pfam	Tropomyosin (IPR000533) - T[77-292] 2.2E-68
PRINTS	Tropomyosin (IPR000533) - T[113-130] 5.9E-50 - T[149-169] 5.9E-50 - T[174-202] 5.9E-50 - T[204-227] 5.9E-50 - T[260-285] 5.9E-50

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TPM3_HUMAN	60.915 %	293	4.6E-99
TPM1_HUMAN	59.507 %	301	3.24E-102
TPM2_HUMAN	58.451 %	280	4.0E-94