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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C9.386.v1....'
  2. Transcript 'Boschl.CG.Botznik201...'
  3. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1636.g08670.02.t

Possible name(s)

TPM2; TPM3; TPM4

Location

S1636 [14,776 / 16,683]

Sequences

Amino acid sequence

Length: 319

>Haaura.CG.MTP2014.S1636.g08670.02.p
SIFDFDIHIISSISTAKCICLINQSTSKMEAIKKKMQMLKMDKENSMDRKEQAEVDRKNV
EVKFGGLEEELHTLEKRLKGTEDELSTHQEKLGQSNDSLEAAEKKASDVSTHICLSITFL
LQAEQEVSDLNKKISGLEDELESAQEKLAMSLTKLEDAEKAADESERGRKVIENRSLKDQ
EKLQLQEVHLQEAKDIAEDADRKYEEVARKLATVEGDLERGEERAELAESKSTELEEEMK
NAANNLKSLEAAAEKYASKEAIFADEVKTLSDRLKDSEDRAESAEKLVVELEKSIDDTSN
YFSSPVTSLSHSLFSFFR*

Nucleotide sequence

Length: 1,047

>Haaura.CG.MTP2014.S1636.g08670.02.t
AGCATATTCGACTTCGATATCCACATCATCTCTTCTATATCTACTGCAAAGTGCATCTGC
TTAATCAACCAATCAACCTCTAAAATGGAAGCTATCAAGAAGAAGATGCAAATGTTGAAA
ATGGACAAAGAAAACTCCATGGACAGAAAAGAGCAAGCTGAAGTAGACAGAAAGAACGTG
GAAGTGAAATTTGGTGGGCTCGAAGAAGAACTTCATACCCTTGAAAAGAGACTGAAAGGA
ACAGAAGACGAACTCAGCACTCACCAAGAAAAACTAGGACAATCGAACGACTCTCTCGAA
GCAGCTGAAAAAAAGGCGTCTGATGTAAGTACTCATATATGCTTATCAATCACTTTTTTA
CTTCAGGCTGAACAAGAAGTATCTGATCTAAACAAGAAAATTTCCGGTCTCGAAGACGAA
CTTGAAAGCGCACAAGAAAAACTCGCGATGTCGCTCACTAAGTTGGAAGATGCTGAAAAG
GCCGCTGATGAAAGCGAGCGAGGACGCAAAGTCATTGAGAACAGATCTCTCAAAGATCAA
GAGAAATTGCAACTCCAGGAAGTTCATCTACAAGAGGCGAAAGACATCGCTGAAGATGCC
GACAGGAAATACGAAGAAGTTGCTCGCAAACTTGCTACGGTTGAAGGAGATTTGGAACGA
GGCGAAGAGCGAGCAGAACTTGCTGAGAGTAAATCAACTGAACTCGAGGAAGAAATGAAA
AACGCTGCAAACAATCTGAAATCTCTTGAAGCAGCTGCAGAAAAGTACGCCTCGAAAGAA
GCAATTTTCGCAGACGAAGTAAAAACGCTTTCAGACCGATTGAAAGATTCTGAAGATCGC
GCTGAGTCTGCTGAAAAACTGGTTGTGGAATTGGAAAAAAGCATTGATGACACTTCCAAT
TACTTTTCGTCACCTGTCACCAGTTTATCTCATTCTTTATTTTCTTTCTTCAGATGAAGT
TTACAAGCAAAAAATGAGAATGAGAAATTTCAACGAAGACATCTCTACTTACTAGAAAAT
CAACCAATGGATGATCATACCGACTAC

InterProScan

Pfam
Tropomyosin (IPR000533) - T[122-297] 3.1E-62
PRINTS
Tropomyosin (IPR000533) - T[126-143] 1.3E-49 - T[162-182] 1.3E-49 - T[187-215] 1.3E-49 - T[217-240] 1.3E-49 - T[273-298] 1.3E-49

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPM3_HUMAN 56.507 % 278 2.7E-93
TPM1_HUMAN 56.849 % 283 1.77E-95
TPM2_HUMAN 58.364 % 260 2.6E-86