- Region 'REG00001402' >
- Transcript 'Boleac.CG.SB_v3.S659...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S170.g02930.02.t
Possible name(s)
ZNF142; ZNF227; ZNF573
Gene model
Location
S170 [7,352 / 12,252]
Amino acid sequence
Length: 603
>Haaura.CG.MTP2014.S170.g02930.02.p
MDVDSLIDVVYQCMLCNEKSRTVDVLREHIRNFHAAEELKNITDESACTSTKQISVLVEQ
DSSLLDETDNGKCFLQKSGKRRKKEAKFELQKVIAAKKGHNETSSPVEGNEKIFVCNFCA
KTCKSAKGLSIHIKSCLTKRACTKCDSGFKTEEEMHSHEQCHYENNTFKCMYCDYVNVQW
TQVKIHMETHNKPDTHKCSECEMAFASSHSLRNHWRFYHLGGKHLCDECGFKALSNYQLC
RHRMSKHSLKFSCAICNYTSDNQIDLDEHTSSRHADFMCKHCAPPTTHTTQEALSIHMNE
AHQGKKCFLCDKCNYVTKLRHHLDKHYLMHSGMQPYKCDKEGCEYSTKDARNLKQHIVVK
HSKPGDLVCRYCNFVTSNQNEWDVHRAMNHMKVYQCAKCLYKAFSSASLRRHRLAKHVDF
EKMRYPCTQCSYRTNFRENLNKHQLTHILRNSRHRCPFCKLNLSNRDELQSHLNAEHSDK
KVFLCKLCSYACKKAQAFRSHSLTHSDVKKQCCQLCEYSARTKAALKSHVLRKHMTNLGN
TALTEDRMQSGYSDDYISKKINRLPTNSILGEQDTVTAMGLADGQCEAQSTLNAPPTCNL
NF*
Nucleotide sequence
Length: 1,999
>Haaura.CG.MTP2014.S170.g02930.02.t
ATGGATGTTGACTCTCTGATTGATGTAGTTTACCAATGTATGCTATGTAACGAAAAAAGT
CGAACTGTTGATGTTTTAAGAGAACATATTAGAAATTTTCACGCCGCAGAAGAGTTGAAG
AATATTACTGATGAAAGTGCTTGCACATCAACCAAACAAATCAGTGTTTTAGTTGAACAA
GATTCCTCATTGCTTGATGAAACTGATAATGGAAAATGCTTTTTGCAAAAGAGTGGAAAA
CGGAGGAAAAAGGAAGCTAAATTTGAATTGCAGAAAGTTATTGCAGCAAAGAAGGGACAC
AATGAGACATCTTCTCCTGTTGAAGGCAATGAAAAAATCTTCGTTTGTAACTTTTGTGCT
AAAACATGCAAGTCGGCAAAAGGATTGTCAATTCACATCAAATCCTGTCTCACAAAGCGT
GCTTGCACCAAGTGTGACTCTGGGTTTAAGACTGAAGAGGAAATGCACTCACACGAACAA
TGTCATTACGAGAACAACACATTCAAATGCATGTACTGTGACTATGTAAATGTCCAGTGG
ACTCAGGTGAAAATTCATATGGAGACACACAACAAACCAGACACTCACAAGTGTTCTGAA
TGCGAGATGGCTTTTGCAAGTTCTCATTCTTTAAGAAATCATTGGAGATTCTATCATCTA
GGAGGTAAACATCTCTGTGACGAATGTGGTTTCAAAGCCCTTTCGAATTATCAACTCTGT
CGTCACAGAATGAGCAAACACTCTCTGAAATTTTCTTGTGCGATTTGTAACTATACGTCC
GATAACCAGATCGACTTGGATGAACACACTTCGTCCAGGCACGCTGATTTTATGTGCAAA
CACTGTGCTCCACCTACAACCCACACAACTCAGGAAGCTCTTAGCATCCACATGAATGAA
GCTCATCAGGGCAAGAAATGTTTTCTCTGTGACAAATGCAATTACGTTACAAAGTTGCGA
CACCACCTTGACAAACATTATCTCATGCATAGCGGCATGCAACCATACAAATGTGACAAA
GAAGGCTGTGAGTACAGCACAAAAGATGCAAGAAACCTTAAGCAGCATATTGTCGTCAAA
CACAGTAAGCCTGGTGATTTGGTGTGCAGATATTGTAACTTTGTGACCTCGAATCAGAAT
GAATGGGACGTCCACAGAGCAATGAATCATATGAAGGTTTACCAGTGTGCCAAGTGTTTG
TATAAAGCCTTTTCATCAGCCTCGTTACGTCGACACAGACTAGCGAAGCATGTCGACTTT
GAAAAAATGCGATACCCTTGCACTCAGTGCAGCTACAGAACTAATTTTCGCGAGAATCTT
AACAAGCACCAGTTAACCCACATATTGCGAAATTCTCGACATAGATGCCCGTTTTGCAAG
CTCAATTTAAGCAACAGAGATGAACTGCAGTCACATTTGAATGCTGAGCATAGCGACAAG
AAAGTGTTTCTTTGCAAACTCTGTTCATACGCCTGCAAGAAGGCGCAAGCATTTCGTTCA
CATTCTCTAACACATAGTGACGTGAAGAAACAGTGTTGCCAATTGTGCGAATATTCTGCA
AGAACAAAAGCTGCTTTGAAATCACATGTGCTTCGCAAACATATGACTAACCTTGGCAAT
ACTGCGCTAACTGAAGACCGAATGCAATCCGGATACAGTGATGACTACATTAGCAAGAAG
ATCAATCGACTACCAACCAACTCCATATTAGGCGAGCAAGACACAGTGACGGCCATGGGT
TTAGCTGATGGCCAATGTGAAGCTCAATCGACATTAAATGCCCCGCCTACCTGCAATCTT
AACTTCTGAAACTTTGCCCTTGGCAGGTCCAACCGGGCTTTCCATTCTTTCTGTAGCTGT
GTGCACCGGAGAAGCAAATATACAGTTGAGTTCTTCCATGTGATCCAGCCGACTTAATTC
AATATTTATGAAGACCTTGTATATGTAGCTCCAATCTGACTCCCAACCAGGCAGTTTAAG
AATTCTGGCGATTTTCGAC
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[10-34] 3.18E-5 - T[109-134] 3.18E-5 - T[141-190] 2.19E-5 - T[179-230] 1.72E-8 - T[320-373] 4.29E-8 - T[477-529] 3.57E-6 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[11-39] 9.349 - T[196-224] 11.676 - T[308-335] 10.658 - T[425-452] 9.037 - T[454-482] 8.538 |
| SMART |
Znf_C2H2_type (IPR013087) - T[11-34] 0.021 - T[114-134] 23.0 - T[140-162] 7.1 - T[168-190] 0.092 - T[196-219] 0.082 - T[224-247] 5.0 - T[251-274] 0.22 - T[277-302] 11.0 - T[308-330] 1.7 - T[336-361] 0.0019 - T[367-390] 1.5 - T[394-417] 0.48 - T[425-447] 0.035 - T[454-477] 0.058 - T[483-505] 1.6 - T[511-534] 0.61 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[142-162] . - T[198-219] . - T[456-477] . - T[485-505] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN227_HUMAN | 24.824 % | 114 | 2.85E-26 |
| ZN573_HUMAN | 25.527 % | 112 | 5.18E-26 |
| ZN142_HUMAN | 24.144 % | 122 | 8.79E-29 |