Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S172.g02954.01.t

Possible name(s)

ECHDC2; ECHS1; HADHA

Gene model

Haaura.CG.MTP2014.S172.g02954

Location

S172 [50,401 / 51,307]

Sequences

Amino acid sequence

Length: 302

>Haaura.CG.MTP2014.S172.g02954.01.p
MNKTIGRAFQVFSYHVRLGHHSRLLFQSNAVHNTRLFSKTTLSEPPIVDPVTIDKRENIT
LIGLNRPECLNAVSAEMARQLKIIMRSFEDDYSSHVAILHGHGSSFCSGFDLKELASGQI
NEEMKSLFLEHGPCGITHKPFKKPVIAALNGYVVGAGLEFALSCDMRIASKDTVLGVFNR
KHGVPLIDGGTIRLPALIGLSRAMDLILTGRPVGAEEALQMGLVNKVVEKEDLTSESFEI
AKQISKYPSFCMLTDRENAYRSVYNPKPFEQAIEREFENGWKVMLMESISGAQKFVKSKK
K*

Nucleotide sequence

Length: 906

>Haaura.CG.MTP2014.S172.g02954.01.t
ATGAACAAGACAATAGGTAGAGCTTTCCAAGTATTCAGCTATCATGTACGCCTGGGCCAT
CATTCAAGATTACTTTTTCAAAGCAATGCTGTACACAATACACGTCTCTTTTCCAAGACC
ACTCTTTCCGAACCACCCATCGTGGATCCTGTTACCATTGACAAGCGTGAAAACATAACA
CTTATTGGTCTCAATCGCCCTGAGTGTTTAAATGCAGTAAGCGCTGAAATGGCGCGGCAG
CTGAAAATTATTATGAGATCCTTTGAAGATGATTATTCCAGTCATGTGGCCATCCTTCAT
GGTCATGGGTCTAGTTTTTGCTCTGGGTTTGATCTAAAGGAGTTAGCATCTGGTCAAATC
AATGAGGAAATGAAATCTTTGTTCCTTGAACATGGTCCGTGTGGCATAACCCATAAACCT
TTCAAGAAACCTGTAATCGCTGCACTTAATGGGTACGTTGTCGGAGCTGGACTTGAGTTT
GCCTTGTCATGTGACATGCGGATTGCTTCCAAGGATACAGTCCTTGGGGTGTTCAACAGG
AAGCATGGTGTGCCCTTGATTGACGGTGGGACGATCAGGCTCCCTGCTTTGATTGGTCTG
TCCCGCGCTATGGATCTCATTCTCACCGGGAGACCTGTCGGTGCTGAGGAAGCTTTACAA
ATGGGTTTAGTCAATAAAGTGGTGGAGAAAGAAGATCTTACTTCTGAAAGCTTTGAAATC
GCTAAGCAAATTTCAAAATATCCTTCGTTTTGTATGCTCACAGATCGTGAAAATGCATAC
AGAAGTGTGTACAACCCTAAACCGTTTGAGCAGGCAATTGAGCGTGAATTTGAGAATGGA
TGGAAAGTGATGTTGATGGAAAGCATTAGTGGTGCTCAAAAATTTGTGAAAAGCAAGAAA
AAATAG

InterProScan

SUPERFAMILY	ClpP/crotonase-like_dom_sf (IPR029045) - T[48-265] 4.15E-61
Pfam	Enoyl-CoA_hydra/iso (IPR001753) - T[55-259] 1.7E-41
ProSitePatterns	Enoyl-CoA_hyd/isom_CS (IPR018376) - T[146-166] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ECHA_HUMAN	33.523 %	95.1	8.75E-22
ECHM_HUMAN	35.602 %	112	3.46E-29
ECHD2_HUMAN	32.642 %	101	3.81E-25