- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1742.g08819.01.t
Possible name(s)
PRSS42; TMPRSS3; TMPRSS6
Gene model
Location
S1742 [12,195 / 15,198]
Amino acid sequence
Length: 525
>Haaura.CG.MTP2014.S1742.g08819.01.p
LALSVNFITTFDSTERIQLLEERRYNRKKNTMAITVSGRTYGIFFVTALCLSIAYGQNEC
LQNNRQDCYPAPVNNANMNQCIADGCIWCSNVTSGPVCVQAAVCSSNITKYDCFSTPTNN
ANAAVCQGFGCLWCPTSDIKCIFNAPAHPQCTASSVVSCNSSRTFDRQQCNAEPNCTYCP
TTVPGRPTCISTNPICPSNSPVNDCFQSPTTGVTESSCGDFGCTWCPNTNASMPWCIHDQ
QGNAACSATSVVDCFTQPTSGVNRTVCEATPGCAYCPTFTPGRPHCIRVASTNHCNNAAR
IDCYWSATSGVNQATCETGTQCAWCPNPTSTSDPWCIEDCPPGMTLRYRQRDSCCLGSSS
RIVGGQQSQLGRWPWTGALFDNGAHICGAVLVAQDKVLTAAHCLDGLTSSSLTVKFGIVS
LNDPTATAIQVINATVHQSYIPGRFDQDVAILTIPSVNLTSNIQVANVPRSENVPNNTKC
FVAGWGKSEYNFIKNLLLGDQLRTNYSRLKWILFPSLNAHQPMPI
Nucleotide sequence
Length: 1,575
>Haaura.CG.MTP2014.S1742.g08819.01.t
CTTGCGCTGAGCGTAAATTTCATAACCACATTCGATTCCACTGAACGAATACAGTTACTA
GAGGAGCGAAGATACAATAGAAAGAAGAATACGATGGCGATTACAGTATCTGGTCGAACA
TACGGCATATTTTTTGTCACAGCGCTATGCTTGAGCATTGCATATGGACAAAATGAATGC
CTACAAAACAACAGACAAGATTGCTATCCAGCTCCCGTCAATAATGCCAATATGAACCAA
TGTATTGCTGACGGTTGTATTTGGTGCAGCAACGTTACTTCTGGCCCTGTTTGCGTTCAA
GCTGCTGTCTGCTCATCAAATATAACAAAGTACGATTGCTTCTCTACGCCGACGAATAAT
GCCAATGCCGCGGTTTGCCAAGGATTTGGATGTCTGTGGTGTCCAACCTCCGATATTAAA
TGCATTTTCAATGCCCCCGCTCACCCACAGTGCACGGCTTCTTCCGTTGTTAGTTGCAAT
AGTTCGCGTACCTTCGATAGACAGCAATGCAATGCCGAACCCAACTGTACATACTGCCCT
ACTACTGTTCCCGGTCGTCCAACATGTATTAGTACAAATCCAATCTGTCCATCTAACTCT
CCCGTGAACGATTGTTTCCAATCACCCACTACTGGGGTGACAGAATCTTCTTGTGGAGAT
TTCGGCTGTACTTGGTGCCCAAACACGAACGCATCCATGCCATGGTGCATCCACGATCAA
CAAGGTAACGCTGCTTGCTCTGCCACTAGCGTCGTTGACTGTTTCACTCAACCTACTAGT
GGTGTTAACAGGACTGTATGCGAGGCTACGCCTGGTTGTGCTTACTGCCCGACATTCACA
CCTGGACGTCCACATTGCATAAGAGTTGCCTCTACGAATCATTGTAATAATGCTGCCCGC
ATCGATTGCTACTGGTCTGCTACATCAGGAGTCAATCAAGCAACTTGCGAAACCGGAACA
CAATGCGCGTGGTGTCCCAATCCGACCAGCACTTCAGATCCTTGGTGCATTGAGGATTGT
CCACCAGGAATGACACTTCGTTATAGACAGAGAGATTCTTGTTGCTTGGGATCTTCTAGC
CGAATTGTTGGTGGACAACAATCACAGCTTGGTCGTTGGCCTTGGACTGGAGCTCTTTTC
GACAATGGCGCTCATATTTGTGGTGCTGTTCTGGTCGCACAAGACAAAGTCCTTACAGCA
GCACATTGCTTAGACGGACTCACCTCTTCTTCGCTCACTGTGAAATTCGGAATTGTATCT
CTCAACGACCCTACAGCAACTGCTATCCAAGTTATCAACGCTACTGTTCACCAGTCATAC
ATCCCAGGCAGATTCGATCAAGATGTTGCCATCCTAACGATTCCAAGCGTGAATCTCACC
AGTAACATCCAAGTGGCAAATGTACCACGATCAGAAAACGTTCCAAACAACACCAAATGC
TTCGTTGCCGGCTGGGGTAAAAGTGAGTATAATTTTATAAAGAATCTTCTTCTGGGGGAC
CAACTTCGAACGAATTACTCGAGGTTGAAGTGGATATTATTCCCTTCGCTCAATGCGCAT
CAGCCTATGCCAATT
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[194-240] 8.521 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[358-493] 3.83E-34 |
| SMART |
Trypsin_dom (IPR001254) - T[361-512] 2.2E-10 |
| Pfam |
Trypsin_dom (IPR001254) - T[362-491] 1.7E-26 |
| CDD |
Trypsin_dom (IPR001254) - T[362-491] 1.81733E-33 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[362-525] 15.437 |
| ProSitePatterns |
TRYPSIN_HIS (IPR018114) - T[398-403] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMPS6_HUMAN | 32.018 % | 82 | 2.78E-16 |
| TMPS3_HUMAN | 37.5 % | 91.3 | 1.17E-19 |
| PRS42_HUMAN | 37.931 % | 82.8 | 1.7E-17 |