- Transcript 'KH2012:KH.C9.68.v1.A...' >
- Transcript 'KH2012:KH.C8.138.v1....' >
- Clone 'cien81028' >
- Clone 'AHC0AAA190YA15' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1759.g08846.01.t
Possible name(s)
DDX27; DDX47; DDX49
Gene model
Location
S1759 [4,428 / 5,772]
Amino acid sequence
Length: 448
>Haaura.CG.MTP2014.S1759.g08846.01.p
MQDIDSPQPVKDKSTFKSLGLNDVLCETCEQLGWKTPMKIQQEAIPVAMDGKDVIGVAET
GSGKTGAFCLPILHALLGNPQRLFALVLTPTRELAFQIDEQFKALGSAIGIKTTVIVGGV
DILGQAIMLAKKPHVVIATPGRLVDHLEKTKGFTLRSIKFLVMDEADRILNMDFEEEVNN
ILKVIPRERQTLLFSATMTRKVKNLQRAALRNPVKCAVNSKYDTVETLDQFYLFIPAKEK
DSYLVTILNEHAGNSFIVFCSTCVNTQRTALLLRNLGFEAIPLNGQMTQPKRLGAITKFK
SKSKTILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRTGKSITFVSQY
DVELYQKIEHLIGKKLPLYETREDEVKLLQERVAEAQRLARMEVKEMKNKQQNKRKHQAE
EDSDNESVPSFNKIHQQKNRRKGRKRF*
Nucleotide sequence
Length: 1,344
>Haaura.CG.MTP2014.S1759.g08846.01.t
ATGCAAGACATTGATTCACCCCAGCCAGTGAAAGATAAGTCGACTTTCAAATCGCTGGGC
CTCAATGATGTGCTATGTGAAACTTGTGAACAACTAGGTTGGAAAACACCCATGAAAATC
CAGCAGGAAGCTATACCCGTTGCAATGGATGGAAAGGATGTGATAGGCGTTGCAGAAACT
GGGTCTGGGAAAACGGGTGCCTTCTGTTTACCAATACTGCACGCTTTGTTAGGTAATCCA
CAGAGATTGTTCGCGTTGGTGTTGACGCCGACTCGAGAACTGGCATTCCAAATAGACGAA
CAGTTCAAGGCACTTGGTTCTGCCATTGGTATTAAGACTACTGTTATAGTGGGAGGTGTC
GATATTCTTGGCCAAGCTATTATGCTAGCCAAGAAACCACATGTCGTTATAGCTACTCCG
GGCCGTTTGGTCGACCATCTGGAGAAAACAAAGGGATTCACGTTGCGATCTATAAAATTT
CTGGTCATGGACGAGGCTGATCGAATTTTGAACATGGATTTCGAGGAAGAAGTGAATAAC
ATTTTGAAAGTCATTCCGCGAGAGCGACAAACTCTTCTCTTTTCGGCGACAATGACGAGA
AAAGTTAAAAACTTGCAGCGAGCAGCCCTGAGGAATCCTGTCAAATGCGCAGTTAATTCA
AAATATGATACGGTCGAAACACTTGATCAGTTTTACCTCTTTATACCAGCGAAAGAAAAA
GATTCTTATCTGGTCACTATCCTGAATGAACATGCTGGCAATTCGTTTATTGTGTTTTGC
AGTACCTGTGTCAACACACAGCGAACAGCTCTGCTGTTGCGAAATCTAGGATTCGAAGCG
ATTCCTCTGAATGGGCAGATGACACAGCCAAAGAGACTCGGTGCCATTACCAAATTTAAA
TCGAAATCCAAGACGATATTGATCGCCACTGACGTGGCAAGCCGAGGTCTTGACATACCT
CACGTTGATGTTGTCATTAACTTTGACATCCCCACTCACTCCAAGGACTACATTCATCGC
GTAGGAAGGACTGCAAGGGCAGGAAGAACAGGAAAATCTATTACATTCGTGTCTCAATAC
GACGTTGAGTTGTATCAAAAAATCGAACATCTGATCGGCAAAAAACTTCCGCTTTACGAA
ACCAGAGAGGATGAAGTCAAGTTGCTTCAGGAGAGAGTGGCAGAGGCTCAGAGACTTGCA
CGTATGGAAGTCAAGGAAATGAAAAACAAGCAACAGAATAAAAGAAAGCATCAGGCTGAG
GAAGATAGTGACAATGAATCAGTCCCAAGTTTTAATAAAATTCATCAGCAGAAAAACAGA
CGTAAAGGAAGAAAAAGGTTTTAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[14-42] 9.514 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[33-231] 3.6E-58 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[39-205] 4.3E-48 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[45-216] 32.842 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[83-369] 1.98E-71 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[162-170] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[227-387] 22.639 |
| CDD |
Helicase_C (IPR001650) - T[228-356] 2.02748E-37 |
| Pfam |
Helicase_C (IPR001650) - T[239-348] 1.3E-30 |
| SMART |
Helicase_C (IPR001650) - T[267-348] 1.8E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 41.111 % | 279 | 4.62E-86 |
| DDX47_HUMAN | 69.866 % | 662 | 0 |
| DDX49_HUMAN | 48.636 % | 385 | 1.66E-130 |