- Clone 'cicl054p07' >
- Transcript 'KH2012:KH.C9.468.v1....' >
- Transcript 'KH2012:KH.L4.23.v1.A...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S18.g00549.02.t
Possible name(s)
AVPR1A; AVPR1B; GNRHR
Gene model
Location
S18 [190,252 / 201,528]
Amino acid sequence
Length: 460
>Haaura.CG.MTP2014.S18.g00549.02.p
MAFQSYNKSIMRYGSETTARQKSSLLYTIARSSFPSEESAIYSEVTTTSSQLSFGTVKSS
NFTDDVFGTTSFVTSTEMSFADTSFLSSIYNDTNVTFSPDECDDKLELLKKEYKLLFDHT
QLIRISVTWSLFLISAIGNLFVLTSLTVRRKRKHRSNAQLLMMHLTFANLAFTFFFIPID
AIWQTTVEWKGGEVLCRITNVLKQFSMYISSAIIVGVVFSVMSKPLAGCPGYFVTQCVDL
RISAGVNLKPYYVYTMIISFFAPLVCILVCYILIAIAISKMAKISKEAEKRCSLMVRDNS
KRSVTRKSLDRAQKMSKIVTALITATFVLCWGPYYVAGLIYWFDRGDSSVPDQQSITRTA
TMVMLLSVYLNPCLHPLITVLLMKEVRDNLFSQCRTVKSPGPRLPPRKISSRKKKKKKAS
VVIKSNKNGAKELLANENGSPDPMYNGNGKDDLLGEAML*
Nucleotide sequence
Length: 1,380
>Haaura.CG.MTP2014.S18.g00549.02.t
ATGGCTTTCCAGAGCTACAATAAATCGATTATGAGATACGGGAGCGAAACGACTGCTCGA
CAGAAATCTTCGCTGCTATACACCATAGCTCGATCATCCTTCCCGAGCGAAGAGTCGGCA
ATCTACAGCGAAGTAACTACGACGAGCAGCCAGTTAAGTTTTGGCACTGTAAAATCGAGC
AATTTTACGGACGACGTCTTTGGCACTACAAGCTTTGTCACATCAACAGAAATGTCGTTT
GCGGACACAAGTTTTCTGTCCTCCATTTACAATGATACGAACGTAACTTTCAGTCCGGAT
GAATGCGATGACAAGTTGGAGTTGCTCAAAAAAGAGTACAAACTCCTGTTCGATCACACA
CAATTGATAAGAATCTCTGTCACGTGGTCACTCTTCCTCATTTCGGCCATTGGAAACTTG
TTTGTTCTGACGAGTTTGACTGTACGTCGCAAGCGCAAACATCGTTCGAACGCTCAACTC
TTGATGATGCATCTTACTTTCGCCAACTTGGCTTTCACGTTTTTCTTCATACCTATCGAC
GCCATTTGGCAAACTACTGTGGAATGGAAAGGAGGTGAGGTCCTCTGTCGAATCACCAAC
GTGCTCAAGCAGTTTTCCATGTATATATCATCAGCAATTATTGTGGGAGTTGTTTTCTCT
GTTATGTCGAAACCACTTGCCGGATGCCCGGGCTATTTCGTTACACAGTGCGTCGATCTT
CGAATTAGTGCTGGAGTCAACCTAAAACCTTATTACGTTTACACGATGATCATATCGTTC
TTTGCTCCGCTCGTTTGCATCCTGGTCTGTTATATTCTTATCGCCATAGCGATATCAAAG
ATGGCAAAAATCTCCAAAGAAGCGGAAAAAAGATGTTCTCTTATGGTTCGGGATAACTCC
AAAAGAAGCGTTACACGGAAAAGCTTGGATCGCGCGCAAAAAATGTCGAAAATCGTAACC
GCCCTTATCACGGCGACCTTCGTTCTTTGCTGGGGACCGTACTATGTGGCGGGGTTAATA
TACTGGTTCGACAGAGGAGACTCTTCTGTGCCTGACCAGCAATCAATCACTCGCACAGCG
ACCATGGTGATGCTGTTGTCTGTATATCTGAATCCATGTCTTCATCCACTCATTACTGTT
TTACTGATGAAGGAAGTTAGAGACAATCTCTTTTCTCAGTGTCGCACTGTTAAAAGTCCT
GGACCAAGACTGCCACCTCGTAAAATCAGCAGCCGCAAGAAAAAGAAAAAAAAGGCATCT
GTAGTGATTAAGAGCAACAAAAACGGCGCGAAAGAATTACTTGCCAATGAAAACGGAAGC
CCTGATCCCATGTACAATGGGAACGGGAAAGACGATCTCCTCGGCGAAGCAATGTTGTGA
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[123-147] 2.3E-17 - T[158-179] 2.3E-17 - T[252-275] 2.3E-17 - T[316-340] 2.3E-17 - T[361-387] 2.3E-17 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[138-214] 1.9E-9 - T[247-378] 2.2E-16 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[138-219] 11.565 - T[237-379] 15.216 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GNRHR_HUMAN | 28.383 % | 107 | 5.18E-26 |