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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S1...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S1943.g09080.01.t

Possible name(s)

GMDS; TGDS; UXS1

Location

S1943 [911 / 4,705]

Sequences

Amino acid sequence

Length: 373

>Haaura.CG.MTP2014.S1943.g09080.01.p
MSSNNHATNGGGKGRKDEPEAKKKTALITGITGQDGSYLTELLLEKGYEVHGIVRRSSQP
NTALIEHLYADRATHQMGNMILHYGDLTDSTCLVKIISQIRPAEIYNLGAQSHVKVSFDL
AEYTANVDGLGTLRLLDAIRTCDLTHSVKFYQASTSEMYGKVMEIPQTETTPFYPRSPYA
AAKVYAYWITMNYREAYGMFTCNGILFNHESPRRGFNFVTRKISRSVAKIHLGLQDVMSL
GNLDSKRDWGHARDYVKGMWMMLQCDKPGDYVLATNEAHSVREFVEKSFGHVGIEIGWKG
KGVDEVGFDQSTGITRIKVDPKYYRPTEVEFLLGDPKKAKETFGWEPVTKFESLVKEMVD
ADLALMKKNPNA*

Nucleotide sequence

Length: 1,119

>Haaura.CG.MTP2014.S1943.g09080.01.t
ATGTCTTCTAACAATCATGCGACCAACGGGGGAGGAAAAGGAAGAAAAGATGAACCGGAG
GCGAAAAAAAAGACTGCATTGATAACAGGAATCACGGGTCAAGATGGTTCGTATTTGACT
GAACTGCTGTTGGAAAAAGGTTACGAAGTTCATGGTATAGTTCGGAGGTCAAGTCAACCA
AACACTGCATTGATTGAACATCTGTATGCTGACAGAGCTACTCATCAAATGGGGAATATG
ATATTACATTATGGAGATCTGACTGACAGCACTTGCTTGGTGAAAATTATAAGCCAGATT
CGTCCGGCCGAAATCTACAATCTCGGAGCTCAAAGTCACGTGAAAGTATCGTTCGATTTG
GCCGAATACACAGCAAACGTGGACGGACTCGGAACTCTGCGACTTCTCGATGCGATACGT
ACTTGCGATTTGACACACTCTGTCAAATTTTATCAAGCTTCGACGAGCGAGATGTATGGA
AAGGTCATGGAGATTCCTCAGACAGAAACAACCCCGTTCTATCCACGTTCTCCGTACGCA
GCTGCCAAAGTTTACGCTTACTGGATAACAATGAACTATCGGGAAGCGTACGGGATGTTC
ACATGCAACGGGATCCTGTTCAATCACGAGAGTCCGAGAAGAGGATTCAATTTTGTGACG
AGGAAGATCTCGAGAAGTGTCGCAAAGATACATCTTGGATTGCAAGATGTGATGAGTTTG
GGAAATCTTGATTCCAAACGTGATTGGGGACACGCAAGGGATTACGTCAAAGGAATGTGG
ATGATGTTACAATGCGATAAACCAGGAGATTACGTTCTTGCGACAAACGAGGCTCACAGC
GTTCGTGAATTTGTTGAAAAATCATTCGGTCATGTTGGTATTGAGATCGGATGGAAAGGA
AAAGGAGTTGATGAGGTCGGCTTCGACCAAAGCACCGGCATTACCAGGATCAAGGTTGAT
CCTAAATATTATCGTCCAACTGAAGTCGAGTTCCTGCTCGGAGATCCGAAGAAAGCGAAA
GAAACCTTCGGCTGGGAACCGGTAACAAAATTTGAATCTTTGGTTAAGGAAATGGTGGAT
GCTGATCTTGCTCTGATGAAGAAGAATCCAAATGCTTAA

InterProScan

PANTHER
GDP_Man_deHydtase (IPR006368) - T[17-370] 1.2E-171
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[24-363] 4.65E-79
TIGRFAM
GDP_Man_deHydtase (IPR006368) - T[24-365] 3.6E-179
Hamap
GDP_Man_deHydtase (IPR006368) - T[24-368] 55.85
Pfam
NAD(P)-bd_dom (IPR016040) - T[27-358] 2.7E-155

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GMDS_HUMAN 69.399 % 534 0