- Transcript 'KH2012:KH.C5.229.v1....' >
- Clone 'csma080b19' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1982.g09130.02.t
Possible name(s)
AP2B1; AP3B2; COPB1
Gene model
Location
S1982 [8,082 / 15,528]
Amino acid sequence
Length: 682
>Haaura.CG.MTP2014.S1982.g09130.02.p
AAAQCYVELIVKEADNNVKLIVLDRLIELRDHPAQEKVLQELVMDILRALSSPDLEVRKK
TLNLALDLVSSRNVEDLVKFLEKEITKSNSIQGHDDTDKYRQLLVRAMHQCTVKFPDTAA
AVIPVLMEFLSDSNELAAADVLVFVREAIQRHDTHKHLILDRLLDVFSSIRNLKIMRGVL
WILGEYCSGIERILHFMDEIRKSVGRLPIVENELKLAAGEAPTETAQDSAPKKPSTQRKV
TEMGTYVTESALSVAPTSKSSEKRPPLLHFFMTGDFSISSSLATALTKLALRFLQACSDT
RKQNSFTAQCMLILSSVLHLGKSGLPTKPVTDDDEERICMCLKALSECTPLMIEVFNVQC
RESLSALLTIRSAEEASRRKAAEKNRSALTAVQADDPINFLQLLAKADPGTLEDQFELSL
SAAVGSMSQKKEARDPLASKLNKVTQLTGFSDPVYAEAYVHINQYDIVLDVLVVNQTTDT
LQNCTLELATLGDLKLVEKPSPLTLAPHDFANIKASVKVSSTENGIIFGNIVYDISGAAS
DRNCVVLNDIHIDIMDYITPADCTDAEFRQMWAEFEWENKVTVNTNISALNGFLQHIIGS
TNMRCLTPEKVLGGDCGFLAANLFAKSIFGECALANVSIEKPSDKGPDAPVQGHIRIRAK
SQGMALSLGDKINQTQKKTKK*
Nucleotide sequence
Length: 2,046
>Haaura.CG.MTP2014.S1982.g09130.02.t
GCTGCCGCACAGTGCTATGTGGAATTGATTGTTAAAGAAGCTGACAACAATGTGAAGCTA
ATCGTTCTGGACAGACTGATTGAATTACGAGATCATCCTGCACAAGAGAAAGTGTTGCAG
GAACTCGTAATGGACATTTTGAGAGCTCTATCTTCCCCTGATCTAGAAGTTCGCAAAAAG
ACGCTCAATCTTGCGCTGGATCTTGTTTCCTCACGCAATGTAGAAGATCTTGTGAAGTTT
TTAGAGAAAGAGATCACAAAATCCAACAGCATCCAGGGTCACGACGACACCGATAAATAT
CGTCAGCTGCTTGTCCGTGCTATGCATCAGTGTACCGTGAAATTCCCGGATACAGCAGCA
GCAGTGATACCTGTGCTTATGGAATTCCTCAGCGACAGCAACGAACTTGCAGCTGCCGAC
GTTCTGGTCTTCGTACGAGAGGCAATCCAACGCCACGATACGCACAAGCACTTGATTCTG
GACAGACTTCTCGATGTGTTTTCGTCCATCAGAAACCTGAAAATTATGCGAGGTGTGCTC
TGGATACTCGGTGAATATTGCTCCGGAATTGAAAGAATTCTTCATTTTATGGATGAAATT
CGAAAATCTGTCGGCAGACTACCTATTGTCGAAAACGAATTGAAACTTGCAGCCGGTGAA
GCACCTACGGAAACTGCACAAGATTCTGCTCCTAAAAAACCCAGCACACAGCGCAAGGTC
ACAGAGATGGGTACATATGTCACGGAATCCGCGCTCAGCGTCGCTCCGACGAGCAAATCA
TCGGAGAAACGTCCTCCGCTCCTTCATTTTTTCATGACCGGAGATTTCTCTATCTCATCG
TCTCTTGCTACAGCTCTCACTAAACTAGCGTTGCGATTTCTCCAAGCTTGTTCTGATACA
AGAAAACAGAATTCATTTACAGCACAGTGTATGTTAATACTGTCAAGTGTACTCCACCTT
GGAAAATCCGGCCTTCCCACCAAGCCTGTAACAGATGACGACGAAGAAAGAATATGCATG
TGTCTAAAGGCTCTGTCTGAATGCACGCCACTGATGATTGAAGTTTTCAATGTCCAATGT
CGAGAATCCCTTTCCGCTCTCCTTACCATACGTTCGGCTGAAGAAGCCTCCAGACGGAAG
GCAGCTGAAAAAAATAGATCCGCTTTGACAGCAGTACAGGCTGATGATCCTATCAATTTC
CTACAACTGCTTGCAAAAGCCGATCCCGGAACATTGGAGGACCAATTTGAACTAAGCCTG
AGTGCTGCGGTCGGTTCGATGAGTCAGAAAAAGGAGGCCAGAGATCCTTTAGCCTCCAAA
TTGAATAAGGTCACTCAGCTAACTGGCTTCTCAGATCCCGTGTATGCAGAGGCCTATGTC
CACATCAATCAGTATGACATTGTTCTGGATGTACTTGTTGTCAATCAAACAACTGACACT
CTACAAAACTGTACCCTTGAGCTAGCTACATTGGGTGATTTGAAGCTTGTTGAGAAACCC
AGTCCTCTGACTCTTGCTCCTCATGATTTTGCCAATATCAAAGCCAGCGTAAAAGTTTCA
TCCACAGAAAATGGTATCATTTTTGGGAATATTGTCTACGATATCAGCGGAGCAGCAAGC
GATCGTAATTGTGTCGTTTTAAATGATATTCATATCGATATCATGGACTACATCACTCCG
GCAGATTGCACTGATGCTGAATTCCGACAAATGTGGGCCGAATTTGAATGGGAAAATAAA
GTGACCGTGAACACCAATATTTCTGCACTCAACGGATTCCTGCAACATATCATTGGATCG
ACAAACATGAGATGCTTGACTCCAGAAAAGGTGCTTGGTGGTGACTGTGGATTTCTGGCT
GCTAATCTTTTTGCCAAATCAATATTTGGTGAGTGCGCCTTGGCAAATGTAAGCATTGAG
AAGCCATCAGACAAAGGACCAGATGCTCCTGTGCAAGGCCACATAAGAATTCGAGCTAAG
AGCCAGGGAATGGCTTTAAGTCTTGGTGACAAAATCAACCAAACTCAGAAAAAAACTAAA
AAGTAA
| Gene3D |
ARM-like (IPR011989) - T[1-266] 1.0E-32 |
| PANTHER |
COPB1 (IPR016460) - T[1-679] 6.9E-267 |
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[2-248] 9.6E-40 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[5-204] 1.65E-29 - T[272-293] 1.65E-29 |
| Pfam |
Coatomer_bsu_C (IPR011710) - T[394-535] 1.8E-59 |
| Pfam |
COPB1_appendage_platform_dom (IPR029446) - T[541-672] 8.9E-58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COPB_HUMAN | 70.147 % | 982 | 0 |