- Transcript 'KH2012:KH.C10.43.v2....' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Clone 'cibd078n01' >
- Transcript 'KH2012:KH.C4.487.v1....' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S19.g00556.01.t
Possible name(s)
AP1B1; AP2B1; AP4B1
Gene model
Location
S19 [42,193 / 45,004]
Amino acid sequence
Length: 937
>Haaura.CG.MTP2014.S19.g00556.01.p
MSDARYFTTTKKGEMFELKADLNSERKDKRKEAVKKVIASMTVGKDVSALFPDVINCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCDDTNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINGTMVEDQGFLDSLKDLLSDSNPMVVANA
VAALSEISESSPRAGQLDFMTSPTINKLLTALNECTEWGQIFILDSLANYTPTDAREAQS
IAERVTPRLQHANSAVVLSAVKVLMRLMDLLNGDKEYQSVLLKKLAPPLVTLLSAEPEIQ
YVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAAQPNIAQVLAELK
EYAQEVDVDFVRKSVRAIGRCAIKVEQSAERCVSTLLDLIRTKVNYVVQEAVVVIKDIFR
KYPNKYESIIANLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLEGFHDESTQ
VQLQLLTAIVKLFLKKPTETQELVQSVLSLATQDSDNPDLRDRGYIYWRLLSTDPAAAKD
VVLAEKPLISEETDLLEPTLLDELICHIASLASVYHKPPSAFIEGAKGAAVIRKTLHGKT
DAEDAEADANTSPPAPTPQTIIPSQDALVTDLLGLDITPAPAVYQPAAQAPVSTMMDPFG
GLDSLLGATAAPTPTATSFVPGAPVAQADLGGLGDLFSVSMAPASFVAPKKVFLEASKAK
GMDLTGTFQRRKGQIMLDMTFTNKAMQAISGFAIQFNKNSFGLTPGQPLNIDMVGANQSN
EVSLQLNTVGPVQKMEPLNNLQVAIKNNIDVFYFATVVPVYVFFTEDGAMDRKVFLDTWK
DIPTANELQCQIENIGGLTSDAAVAKLNANNIFTIAKRNVDGKDMIYLSLKFPNGIWILA
EMRSQQGSSNFFFAYKTRSPEVAPLIHLAVQDILSN*
Nucleotide sequence
Length: 2,811
>Haaura.CG.MTP2014.S19.g00556.01.t
ATGAGTGACGCGAGATATTTCACGACGACTAAGAAGGGTGAAATGTTCGAACTAAAGGCA
GATTTGAACAGCGAGCGAAAAGATAAAAGGAAAGAAGCAGTCAAGAAGGTGATTGCTAGC
ATGACAGTAGGAAAAGATGTGAGTGCCTTGTTCCCCGACGTGATCAACTGCATGCAAACT
GACAACCTCGAATTGAAGAAGCTAGTTTATCTCTACCTGATGAATTATGCAAAAAGTCAA
CCAGACATGGCCATCATGGCGGTGAATACGTTTGTCAAAGACTGTGACGACACTAATCCT
CTCATACGTGCGCTGGCAGTACGTACTATGGGCTGTATCAGGGTGGACAAAATCACAGAG
TATCTGTGCGAACCGCTGCGCAAATGCCTGAAGGACGAAGACCCATACGTTAGAAAGACC
GCTGCTGTTTGCGTAGCCAAACTTTATGACATCAACGGCACCATGGTGGAAGACCAAGGT
TTTTTAGACTCGCTTAAAGATCTATTGTCCGATTCCAACCCAATGGTAGTAGCAAATGCC
GTCGCTGCACTATCGGAAATCAGCGAGTCTTCACCGAGGGCGGGTCAACTTGACTTTATG
ACCTCCCCGACCATAAACAAGCTGTTGACTGCTCTGAATGAATGCACAGAATGGGGACAA
ATCTTTATCCTTGATTCACTTGCAAACTACACACCTACTGATGCTAGAGAGGCACAGAGC
ATTGCTGAGAGAGTAACCCCAAGGCTTCAGCATGCTAATTCAGCAGTGGTGTTGTCTGCT
GTGAAAGTATTAATGCGTCTCATGGATCTACTCAATGGAGACAAAGAATATCAATCCGTG
TTGTTGAAGAAACTAGCTCCTCCTCTTGTTACCTTGCTCTCCGCTGAGCCAGAGATCCAA
TATGTCGCCTTGAGGAATATCAACCTTATCGTACAGAAGAGACCAGAGATTCTTAAACAC
GAAATGAAGGTGTTCTTCGTGAAGTACAACGATCCTATCTATGTCAAGTTGGAAAAGTTG
GACATCATGATTCGCTTAGCAGCTCAGCCAAACATTGCACAAGTTCTTGCTGAACTGAAG
GAGTATGCACAAGAAGTGGACGTGGATTTCGTACGTAAATCCGTCCGTGCCATAGGTAGA
TGCGCCATAAAGGTTGAGCAATCTGCTGAGAGATGCGTGAGCACTCTGCTGGATCTTATT
CGTACCAAAGTCAATTATGTAGTGCAAGAAGCCGTTGTGGTAATCAAGGATATATTCAGA
AAATATCCCAACAAATATGAGAGTATCATTGCGAACCTCTGCGAGAACCTGGATACACTT
GATGAACCGGAGGCAAGAGCCAGTATGATCTGGATCATCGGAGAGTATGCTGAAAGGATA
GATAATGCCGACGAGCTTCTTGAATCTTTTCTGGAAGGTTTCCATGACGAGAGCACACAA
GTCCAGCTTCAGTTGTTGACTGCAATCGTGAAACTCTTCCTGAAAAAACCTACAGAAACC
CAGGAACTGGTCCAGTCTGTACTCAGTTTGGCAACACAAGACAGTGACAATCCTGATCTC
CGTGATAGGGGTTACATTTACTGGCGCCTGCTTTCCACGGATCCTGCTGCTGCAAAGGAT
GTAGTATTGGCAGAGAAACCTTTGATTTCAGAAGAGACTGACTTGCTAGAGCCTACACTG
CTGGATGAATTAATATGTCATATTGCTTCTTTGGCTTCGGTCTACCACAAACCCCCAAGT
GCGTTTATAGAAGGTGCAAAAGGAGCTGCAGTTATCAGAAAAACATTACATGGAAAGACA
GATGCAGAGGATGCAGAGGCGGACGCTAACACCAGTCCTCCGGCTCCAACACCTCAGACA
ATAATTCCATCGCAAGATGCTCTTGTCACGGATTTGCTCGGTTTGGACATCACACCAGCC
CCGGCGGTATATCAGCCCGCTGCACAAGCTCCAGTTTCTACCATGATGGATCCCTTCGGT
GGTCTAGATTCTCTTCTCGGGGCTACAGCCGCTCCGACACCCACGGCCACTAGTTTTGTA
CCAGGAGCGCCAGTGGCCCAAGCAGATCTAGGTGGCTTAGGAGACCTGTTCAGCGTCAGT
ATGGCTCCAGCCTCCTTCGTTGCACCGAAGAAAGTTTTTCTCGAGGCATCCAAAGCGAAA
GGAATGGATCTGACTGGAACGTTTCAAAGACGCAAGGGTCAAATAATGTTAGACATGACT
TTTACAAACAAAGCTATGCAGGCTATATCAGGTTTTGCTATCCAGTTTAATAAAAACAGT
TTTGGTTTAACTCCTGGACAACCTCTCAACATTGACATGGTAGGAGCCAATCAAAGCAAT
GAGGTTTCTCTCCAATTAAACACGGTGGGTCCTGTGCAAAAGATGGAACCTCTTAACAAT
TTGCAAGTAGCCATCAAAAACAACATCGATGTCTTCTATTTCGCCACAGTCGTACCTGTA
TACGTGTTTTTTACTGAAGATGGGGCGATGGATAGGAAAGTCTTTCTGGATACTTGGAAA
GACATTCCAACGGCCAACGAACTACAGTGTCAAATCGAAAACATCGGTGGTTTGACTTCG
GACGCGGCAGTTGCGAAGCTAAATGCCAATAACATATTCACGATCGCAAAACGGAATGTA
GACGGCAAGGACATGATCTATTTATCGTTGAAGTTTCCGAACGGTATTTGGATTTTGGCC
GAGATGAGGTCACAGCAAGGCAGTTCGAATTTCTTCTTTGCATACAAGACAAGATCACCA
GAAGTAGCTCCTCTAATTCATCTAGCTGTGCAAGATATCCTATCCAACTAA
| Gene3D |
ARM-like (IPR011989) - T[1-592] 1.4E-266 |
| PANTHER |
AP_beta (IPR026739) - T[1-936] 0.0 |
| PIRSF |
AP_complex_bsu_1_2_4 (IPR016342) - T[1-767] 1.4E-303 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[10-581] 5.28E-142 |
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[14-533] 2.7E-159 |
| SMART |
Armadillo (IPR000225) - T[149-189] 0.66 - T[274-312] 64.0 |
| SMART |
Clathrin_a/b/g-adaptin_app_Ig (IPR008152) - T[702-815] 4.2E-11 |
| Gene3D |
Clathrin_b-adaptin_app_Ig-like (IPR013037) - T[704-819] 1.7E-45 |
| SUPERFAMILY |
Clathrin_app_Ig-like_sf (IPR013041) - T[707-821] 6.28E-36 |
| Pfam |
Clathrin_a/b/g-adaptin_app_Ig (IPR008152) - T[722-814] 3.3E-8 |
| Gene3D |
TBP_dom_sf (IPR012295) - T[820-936] 1.5E-38 |
| SUPERFAMILY |
Coatomer/calthrin_app_sub_C (IPR009028) - T[823-936] 7.06E-37 |
| SMART |
B-adaptin_app_sub_C (IPR015151) - T[824-935] 1.4E-35 |
| Pfam |
B-adaptin_app_sub_C (IPR015151) - T[825-934] 2.0E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AP2B1_HUMAN | 73.016 % | 1372 | 0 |
| AP1B1_HUMAN | 71.967 % | 1335 | 0 |
| AP4B1_HUMAN | 29.809 % | 269 | 7.38E-78 |