- Transcript 'Cisavi.CG.ENS81.R7.2...' >
- Transcript 'Haaura.CG.MTP2014.S1...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S1.g00018.02.t
Possible name(s)
DDX42; DDX46; DDX5
Gene model
Location
S1 [128,412 / 135,070]
Amino acid sequence
Length: 907
>Haaura.CG.MTP2014.S1.g00018.02.p
MKKRKDRVETWRKEQKLALGQPSQDDDDDAPGGKQWTLDDDDDDDEEDGEMEEEKEETVK
DENGVEEEKENEKIDSPKKMEEAEEDEDEDDPLDAFMSNLKAENDKHMFGNTTENTSGPK
ISRVVAVAKKKSAHVKPGKKKGELMEDDADAMEYSSEEEEESLDSALGKFRNKQQGQGRK
LDTVIDHSKIQYEDYRKKFYVEVPELAAMKEEEVDEMRMNLEHTKVRGKNCPKPIKTWAQ
AGVSFKVLNALKKLNFEKPTSIQAQALPVIMCGHDMMGIAKTGSGKTLAFVLPMLRHIMD
QRPLEDKEGPIAVIMTPTRELALQITKECKKFTKPMKLKVVCVYGGTGISEQIAELKRGA
EIIVCTPGRMIDMLAANSGRVTNMRRCTYLVLDEADRMFDMGFEPQVMHIMNAVRPDRQT
VMFSATFPRQMEALARRILNKPIEVQVGGRSVVCSDVTQHVHILEKDQKYFKLLELLGLY
QEQGSILVFVDKQEHADHLLKDLMGSSYPCMALHGGIDQYDRDSVINDFKNGITGLLIAT
SVAARGLDVKNLILVINYDCPNHYEDYVHRCGRTGRAGSKGFAYTFIVKEQARHAGDIIK
ALELSGASVSKELETLWATYKSDLTAQGKAVSKNSGFTGRGFKFDETEDELVRERKQFQK
AALGLHDSDDESPAKDIDEQIENMFNSKKRVKDVVGPLVLPGAGGESAQGQGGLSGSNIE
KLEIAKRLAVRINVKKNLGAEAQDVTQQAATAILKGGAFQAPKVSAKTIAGQLAEKINQK
LNYVPQEKSENDDEENPDGQGATFKRYEEELEINDFPQTCRWKVTSKDTLSQISEYSEAG
ITIRGQYFPSGKQPEEDERKLYLAIEAVSEMAVQKAKNEITRLIKEELIRLQNSYQPINK
GRYKVT*
Nucleotide sequence
Length: 3,222
>Haaura.CG.MTP2014.S1.g00018.02.t
ATGAGAAGAAGCGTTCAAGATCCAGATCCCCGGGCTTGAAAAAAAAATACTCCCGATCTT
ATTCTCGGCATTCGAAAGGCTCTTCTAAAAGATCAAGATCTAAACGCTCTCGTTCAAGGT
CGAGGTCACGAGATAAAAGTCGAAGAGGCCGTGATAAAAAATCTCACACGGAAGGTCAAA
AACGAAAACAGAGAAGCTCAAGTACAGAAAGAAGCAAATGAAGATAATAAAAGTAAATCC
AAGTCTACATCTGAAACTAAAGATAAATCTGAAAAGAGAAGCAGAAGATCAAGGTCTAGA
TCAAGAGGAAGAAAAAGGTCTCATGAACGACGTAGTTCAAGAAATGAAAGGTCAAGGAAA
AAGGGTAGATATGGAAAACACGACAAGGAAGAATCCCGTGACAAAGATAGGGATGTAGTT
AAAGATCCTGAGAAAAAGGAGAATAACAAGGCGAAAGACACATTATCAAAGGATTTTGAA
CAAGCCCGGTTAGAAGAGGAGATGAAAAAGCGAAAGGACAGAGTAGAAACCTGGAGGAAA
GAGCAGAAGCTCGCTCTCGGGCAGCCGTCTCAAGACGATGACGATGATGCACCAGGAGGG
AAACAGTGGACTTTGGATGATGATGACGATGATGATGAGGAGGATGGGGAGATGGAAGAG
GAGAAGGAAGAAACCGTGAAAGATGAGAATGGTGTAGAGGAGGAAAAGGAAAATGAAAAG
ATAGATTCTCCGAAAAAGATGGAAGAGGCTGAAGAAGATGAAGATGAAGATGATCCTCTG
GATGCATTCATGAGTAATTTGAAGGCTGAGAATGACAAACACATGTTTGGGAACACAACA
GAAAATACAAGTGGTCCTAAAATCAGCCGGGTGGTAGCAGTAGCGAAGAAGAAATCGGCG
CATGTCAAACCAGGAAAGAAGAAGGGAGAATTAATGGAGGATGACGCTGATGCTATGGAA
TACTCATCAGAGGAAGAGGAAGAATCACTCGACAGTGCCTTGGGTAAATTCCGAAACAAG
CAGCAAGGTCAAGGCCGTAAGCTCGACACAGTCATCGATCATTCAAAAATCCAATATGAA
GATTATCGCAAGAAGTTCTATGTTGAGGTTCCTGAGCTGGCTGCCATGAAGGAAGAAGAA
GTTGATGAGATGAGAATGAATTTGGAACATACCAAAGTTCGTGGGAAGAACTGCCCCAAG
CCGATCAAAACTTGGGCACAGGCTGGGGTCTCTTTTAAAGTACTGAATGCTCTGAAAAAA
TTGAATTTTGAAAAGCCCACCTCAATACAGGCGCAAGCTCTTCCCGTTATAATGTGCGGC
CATGACATGATGGGTATAGCAAAAACTGGAAGTGGCAAAACGTTGGCCTTTGTCTTGCCA
ATGCTCCGACATATAATGGACCAGAGACCTCTGGAAGATAAGGAGGGTCCAATTGCTGTC
ATCATGACACCTACAAGAGAACTAGCTCTCCAGATCACTAAAGAATGCAAAAAGTTCACC
AAACCTATGAAACTGAAAGTTGTTTGTGTGTATGGCGGGACAGGGATTTCCGAGCAAATC
GCGGAGCTGAAACGTGGTGCCGAAATAATCGTGTGCACTCCGGGAAGAATGATTGACATG
CTCGCAGCGAACAGCGGCAGAGTTACAAACATGAGAAGGTGTACTTATCTGGTTTTGGAC
GAAGCGGATCGTATGTTTGATATGGGTTTTGAGCCACAAGTAATGCACATAATGAATGCC
GTCAGACCCGACCGACAGACGGTGATGTTTTCTGCCACATTTCCCCGTCAAATGGAAGCA
CTAGCAAGAAGGATACTTAACAAGCCGATCGAGGTCCAAGTAGGTGGTCGGAGTGTGGTT
TGTTCTGATGTCACCCAACATGTCCATATACTTGAGAAAGACCAAAAATACTTCAAACTG
TTAGAGTTGCTCGGACTCTATCAAGAGCAAGGATCGATTTTGGTTTTCGTAGATAAACAA
GAACATGCTGATCACCTTCTAAAAGATCTAATGGGCAGTAGCTATCCTTGTATGGCTTTG
CATGGAGGTATCGACCAGTATGATAGAGATTCTGTTATTAACGATTTCAAAAATGGCATC
ACGGGGCTCCTTATCGCCACCTCGGTTGCTGCTAGAGGACTGGACGTAAAAAATCTTATC
CTGGTTATAAACTATGACTGTCCCAACCACTATGAAGACTATGTTCACAGGTGCGGACGT
ACTGGGCGGGCCGGATCCAAGGGTTTTGCTTATACCTTCATTGTTAAAGAACAAGCGAGA
CATGCGGGTGATATTATAAAAGCATTGGAGTTGAGTGGTGCCAGTGTTTCAAAGGAGCTA
GAGACCTTATGGGCCACCTACAAGTCAGATCTTACAGCTCAAGGAAAGGCCGTCTCCAAA
AACAGCGGTTTCACCGGACGTGGATTTAAATTCGACGAAACCGAAGACGAACTCGTCAGA
GAAAGGAAACAGTTCCAGAAAGCAGCTTTAGGGCTGCATGATTCAGATGATGAATCCCCT
GCAAAAGATATCGATGAACAAATCGAGAATATGTTCAACAGCAAAAAGAGGGTAAAAGAT
GTTGTTGGTCCCTTGGTATTACCTGGGGCAGGGGGAGAAAGTGCCCAAGGACAGGGTGGA
CTTTCTGGCTCAAACATTGAGAAATTGGAAATTGCAAAGAGGTTGGCAGTTCGTATCAAT
GTTAAGAAGAATTTGGGAGCTGAAGCTCAGGACGTCACCCAACAAGCAGCAACTGCCATC
CTTAAAGGAGGAGCGTTTCAAGCTCCGAAAGTCTCTGCAAAGACCATCGCTGGACAGTTG
GCGGAAAAAATTAATCAGAAATTGAACTACGTTCCCCAGGAGAAAAGTGAAAACGATGAT
GAAGAGAATCCTGACGGACAAGGCGCAACATTCAAACGTTACGAAGAGGAACTAGAAATT
AATGATTTTCCACAGACATGTAGATGGAAAGTCACCTCGAAAGATACACTCAGTCAAATT
AGTGAATATAGCGAAGCTGGTATTACTATTCGTGGGCAGTATTTTCCGTCTGGAAAGCAA
CCCGAAGAGGATGAGAGAAAACTCTATCTCGCTATTGAAGCTGTTTCTGAAATGGCTGTA
CAGAAAGCTAAGAACGAAATCACCAGACTCATTAAGGAGGAACTAATAAGACTGCAAAAC
TCCTACCAGCCTATAAATAAAGGCCGTTACAAAGTCACGTAA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[225-447] 1.1E-72 - T[383-619] 1.65E-51 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[236-264] 10.777 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[255-460] 4.1E-64 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[260-433] 3.2E-50 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[267-445] 32.245 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[391-399] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[456-617] 21.045 |
| CDD |
Helicase_C (IPR001650) - T[459-586] 4.05816E-31 |
| Pfam |
Helicase_C (IPR001650) - T[471-578] 3.0E-25 |
| SMART |
Helicase_C (IPR001650) - T[493-578] 5.6E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX46_HUMAN | 66.338 % | 1153 | 0 |
| DDX5_HUMAN | 42.958 % | 367 | 3.4E-116 |
| DDX42_HUMAN | 45.572 % | 395 | 3.17E-123 |