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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S200.g03226.01.t

Possible name(s)

AL359736.1; ARHGEF9; SPATA13

Location

S200 [15,964 / 26,134]

Sequences

Amino acid sequence

Length: 367

>Haaura.CG.MTP2014.S200.g03226.01.p
MDEEELSFQVGNVICVKNADDPVWWWGQIDSAEGWFPATFVLVNQNSQKTPDQLTTSSDE
DIAIEEDENICEKCGKITKENDQNDVHCTCISISQGSALNNKERKLQQMRANVIREIVSS
ERVFVRHLKDVVEGYINRCRRRADMFSEECIATIFGNIEKIYEFQKRFLEELESSNNGGA
PYASDIGTIFLRNKKDFEIYSEYCNNHPKAISTLMDLSSSKKYRHFLEACRLLQQMIDIS
IDGFLLTPVQKICKYPLQLAELLKYTNTEDAGYQNVRDALNAMKDVAQLINDRKRLIENI
DKITMWQKNIINWENEDILARSTELIHSGEIFVIFIPKSKPQQRVGFLFDNQLILCKKVL
TITVPT*

Nucleotide sequence

Length: 2,784

>Haaura.CG.MTP2014.S200.g03226.01.t
AAAAAGCTCATGCGCTCACAAAGCCTCTACAAGCCATCCAAGCCAACAACGCCAAAACCA
ATGAAAAATACACCTGGTGGCTCCTTAAACGATTTAAGATTTCGATTCTCTCAACACAAT
CTTTATCGTTTTACGGAAAATAATAGATCTGTTTCAGGTGAAATCAGACGACAGCTAGAA
ACCGGTAGCTTATGTGATTTACGATCTCCGCTATTGCAGAGAAATACTGCCGCGGAGAGA
TACTCCTTAACTGCAGTGAATTACGACAGATCTGAGAACATTGCCGGTAAAGCTGATGCG
GCGCCATCACGAGGAATAAGCAGACTGGTTAGAAAGAGGTCAAGGCCATTATCCGAAGTG
GCGAGTTCAGGGAGATGGGTAGAGGCGATACCAGAGCACGGCGTACTTACTGATACAAAC
AGGAATACTGCAGACGCGAAAGAAAGTTCTGAAACTCTTACGATCAAGCCACATTTATTG
CACCCTACCGAGGGAGTTGTTTTGACTGATACGAATGCTGAAAAACTTTTTTCTGAAAGC
AATAATGGTTCTGCTAGAGAAAGCGATAAAAGACCGGAGGATATAATCGTATCGAATTCA
GAGTTGTTAAGTGTCAACGATATCATCCGTAAGAAGGGTTCAGCTGTTGAGCAGAAACAA
AAGCGGCGCATGAGATACGGTGTTATGTCGGCAAGTTACTGTGACCAAGGTAGTCTGGAG
GACATAACATTCATCGATAGAAACCTACCCAGACCAATGTCAATGGATAATGGAATAGAT
GCACTGGATATGAAACCTGGAACACACGGAAGTGCATCGTTGCATTTAATGGGGTATCGG
AATAGCGGATCCAATTTACTGAGTGTTCTGACAATGAATTCCTCCCTGAGCATACCGGCA
GGACTGGACAGTCTCGATAGAGCAAGCAAGATACAACCTACGAACAACACAGGCTATACA
AATGGAAGAAGAATTTTATGGGTAGATTCACCAACGGAAACTACAACAGGAGACATTTCC
ATTACAGATTCCGATGTCCAGGTACTTTGCGTTTAAGCTTTACATGTTTCGGCAAATGAC
CAAGATTCAGTTAATAATATATTCGCCGAGGCTCTGTGGGATCATGTTACAATGGATGAA
GAGGAACTTTCTTTTCAAGTTGGCAATGTTATTTGCGTAAAGAATGCAGATGATCCAGTT
TGGTGGTGGGGTCAAATCGATTCTGCTGAGGGTTGGTTCCCGGCTACGTTCGTTTTGGTG
AACCAAAATTCACAGAAGACCCCAGACCAGCTCACGACATCTAGCGACGAGGATATTGCT
ATCGAAGAAGACGAGAATATTTGTGAAAAATGTGGAAAAATTACAAAAGAAAATGATCAG
AATGATGTTCATTGCACGTGTATATCCATAAGTCAAGGCTCAGCGTTGAACAACAAGGAG
CGCAAGTTGCAACAGATGCGTGCTAACGTTATTCGAGAAATTGTTTCTTCCGAACGCGTC
TTCGTGCGACATTTGAAAGACGTTGTTGAGGGTTACATAAACAGATGCAGAAGAAGAGCC
GATATGTTTTCGGAAGAGTGCATCGCTACTATATTCGGTAACATAGAAAAGATTTATGAG
TTTCAAAAGCGATTTCTTGAAGAGTTGGAAAGCAGTAACAACGGAGGTGCCCCATACGCA
AGTGATATTGGGACAATATTTTTAAGAAACAAGAAAGATTTCGAAATATATTCCGAATAC
TGCAACAATCATCCAAAGGCTATCTCAACATTAATGGACTTGTCTTCATCCAAAAAATAT
CGTCATTTCCTTGAGGCTTGTCGTCTGCTTCAGCAAATGATCGATATTTCAATTGATGGA
TTTTTATTAACTCCAGTGCAGAAGATATGCAAATATCCGCTTCAGCTGGCAGAACTTCTT
AAGTACACAAATACCGAAGATGCTGGTTATCAAAATGTCCGAGATGCTCTGAACGCCATG
AAGGACGTTGCGCAGTTAATTAATGATCGTAAACGACTGATAGAAAACATTGATAAAATA
ACTATGTGGCAGAAAAATATCATTAATTGGGAGAACGAAGATATTCTTGCGAGGAGTACC
GAGTTGATCCACTCTGGGGAGATTTTTGTCATATTCATTCCTAAGTCAAAGCCTCAGCAA
CGAGTAGGATTTCTCTTTGACAACCAGTTAATACTGTGCAAAAAGGTGTTAACCATAACT
GTACCTACGTAATCACAGGATCTTCTTCGAAAAGATTTACTGTACTACAAGTTTCGTTTC
GATCTGCGCGACTGTGACATTATGCATCTGGATGAAAATCATTTCAAAGAGTGGCTCAAT
TCTGCGTCAGCTCTTGGAAATGTCGCTACAGATTGTTGTTGGAAAATTCAGTCACGAACT
TCGCCTCTATGCGTGGCTATGTTCTGCAAATCTGGTGAAAGCGCTACAAAATGGTTAAAA
GCGTTCGAACAAGAAAGAAAAATCATACAAGATGAAAAACGACACGCACTGTTGATACCC
GATGAGGTCAAGCATGAGATTATAAAAAAGAGTATTTCTCGTTCTCAGAAACAGAAAGAT
AATTCTCGATTTTCGATTTACATAAGTTATCGGCAGCGTCTCAAGATTATGCAACGGGCT
CAGACACGTAAAAGGGGCTCATTATTCAGCAACACAGAGAATAATTCAGCGACCGCCTTC
TTGAGTAACATTGCAGTAAAACTAAAACCATTCCGCAAAAATTCTTCTTCTGGAAATTTA
ACGACAGCACAAACACCAACTTAA

InterProScan

ProSiteProfiles
SH3_domain (IPR001452) - T[1-46] 11.239
SMART
SH3_domain (IPR001452) - T[1-45] 0.006
SUPERFAMILY
SH3-like_dom_sf (IPR036028) - T[2-55] 9.32E-13
Pfam
SH3_domain (IPR001452) - T[2-38] 6.5E-6
Gene3D
DBL_dom_sf (IPR035899) - T[79-315] 1.0E-75
SUPERFAMILY
DBL_dom_sf (IPR035899) - T[99-314] 4.71E-59
ProSiteProfiles
DH-domain (IPR000219) - T[109-293] 33.16
CDD
DH-domain (IPR000219) - T[110-291] 2.99052E-49
Pfam
DH-domain (IPR000219) - T[113-291] 6.5E-46
SMART
DH-domain (IPR000219) - T[113-292] 5.2E-54
Gene3D
PH-like_dom_sf (IPR011993) - T[316-363] 1.5E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ARHG4_HUMAN 50.833 % 365 1.93E-121
SPT13_HUMAN 52.222 % 368 8.65E-123
ARHG9_HUMAN 51.381 % 361 7.66E-122