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  1. Clone 'cien144608' > 
  2. Transcript 'Phmamm.CG.MTP2014.S4...' > 
  3. Transcript 'KH2012:KH.C7.526.v2....' > 
  4. Transcript 'Phfumi.CG.MTP2014.S6...' > 
  5. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S204.g03266.03.t

Possible name(s)

MSI1; RBM24; RBM38

Gene model

Haaura.CG.MTP2014.S204.g03266

Location

S204 [19,887 / 32,578]

Sequences

Amino acid sequence

Length: 307

>Haaura.CG.MTP2014.S204.g03266.03.p
MTSAATTNFFTNTAAVPAGHQMINSAGKPVNMTYHTQKDTTFTKIFVGGLPYHTNDASLR
KYFEQFGEIEEAVVITDRMSSCSKGYGFVTMTDKAAAERACKDPNPVIDGRKANVNLAYI
GAKPRSLQTTQPGAIVRQGAYAQYVQPIQQSPFGMQAVYSYNPTTYVTPNGVLVQAHNPF
AQQSPLIDYGGTPYGAAQLASTPFAQDVAASVGAATLTSSPFSATAQYQAASAVVQAQPH
PLAAVSHPGYTATYQAATIPGAYHAAAQGYATMSALQPPLATTPNQAYAHLTAQLQAGER
LTLANP*

Nucleotide sequence

Length: 2,019

>Haaura.CG.MTP2014.S204.g03266.03.t
GGAGAGTCTAAATCTCAGGAGGAAAAACAAATGAAGAGAAATACTAGACGTTGTTTGAGC
AGTGGCGCTTTTTCATTCGGGAGAATTGAAACCGAGGACATAGCCTACTGTGTTAGGCGT
CTTCTTCTACTTCAGCAGAAGGTTAAGGGATTTATATTTATCGTTTACTCAATTTCGTAT
CTTACTGTGGAGATGAATGTTAATATAGCAAGAGGGCCCAGATTTGGTGAAGTACTCTAT
TGGGTTAACTTGTATGTAGATCAAACGAATAATTCGTTGATCCCGATCTCCTGAGATTAC
GCAAAGAAGATCTGTTGCTATGCACGATCTGTTTCCGGACAACTGCTCTTAGCGCCCATT
CTAACTCCGAATAAAATCAATCAACGATTTTTCCTTTTTCGTTCCCTAAACAAATCAAAA
TTACCACCCAAATAGCTCAACACATCTCCACGGTCCCTACATCGAAATATCGAGTCTAAA
AGCCTTCCAACTAATTTAGCCGACGAACAGACGACGACGAATCTTACGAACGTATCCAGT
GACGAAGCAGCACGCTCTTCTTCCTGGCCTTCACAATTGAAGGCAGTCGAGCGGAACGCA
GCCACTGTGGAGAGTTTAACTAGAAAACGCAGGGCTAGCCCTAACACGTTACAATTGGAA
AATTCTTGTGACTCAATCGCAACGCTCATAGGGAACACCTCATCAAACAACTGTATACAG
ACGGAGCTCGAAGAAAACGCAAAGAAATTTCGCATAATCTCGGAAGCGAACGCTATCACC
ACAGCTGTTAACCACGTGCCTGCAATAGGCCACCGCACTGCGATTGATCCGACAGCTCTT
TCAGCGAGAGGTATCGTGGTAATACCTAGTTCTCATCAAGCCGCAGCGATTCGACATCCT
TCCATTGCCAACCAATATTTCTTAGGTTCGAATCCATCTACAGCAAACAGCAACGGTCTA
CTCTGTGCCCAGCCCTCACCTATCGGTCCTCAATCTTACCAGATACAGACACCCTCGGGA
GCGACAGTACTTGTGCAGCAGTCTCCCCACACTCAATCAGTGCTACCAGTTCAAACTCAG
GCACAAGTGGCAGTTCCCATGACAAGCGCAGCTACTACAAACTTTTTTACGAACACGGCC
GCTGTTCCTGCTGGTCACCAGATGATTAACAGTGCTGGAAAGCCGGTGAACATGACATAT
CACACGCAAAAAGACACAACTTTTACCAAAATATTCGTCGGAGGTCTTCCATATCACACG
AACGATGCTTCCCTGAGGAAATATTTCGAACAGTTCGGCGAGATCGAAGAAGCGGTGGTT
ATTACTGATAGGATGTCGTCATGTTCGAAAGGATACGGATTTGTAACAATGACAGACAAG
GCTGCCGCGGAGAGGGCATGCAAGGACCCGAATCCCGTGATTGATGGTAGAAAAGCAAAC
GTGAACCTAGCGTACATCGGTGCCAAACCAAGAAGCTTACAGACCACTCAACCAGGTGCC
ATCGTCCGACAAGGTGCCTATGCGCAGTATGTACAGCCGATTCAGCAATCACCGTTCGGG
ATGCAAGCAGTGTATTCGTACAATCCGACGACTTACGTCACTCCTAATGGCGTCCTTGTG
CAAGCGCACAATCCGTTTGCCCAGCAGTCTCCGTTGATTGATTACGGCGGAACGCCTTAC
GGTGCAGCACAACTTGCCTCGACGCCATTCGCTCAAGATGTGGCCGCATCTGTTGGTGCC
GCGACGCTCACGAGTTCTCCGTTTTCTGCAACAGCCCAATACCAAGCCGCGTCGGCGGTC
GTTCAAGCTCAGCCTCATCCTCTGGCAGCGGTGTCTCATCCGGGATACACGGCAACCTAT
CAAGCAGCCACCATTCCCGGCGCCTATCACGCTGCAGCTCAGGGTTACGCGACGATGTCC
GCACTCCAACCACCGCTGGCAACCACACCCAATCAGGCCTACGCACATCTGACCGCGCAG
CTTCAAGCCGGCGAACGACTTACCCTAGCTAATCCTTAA

InterProScan

SUPERFAMILY
RBD_domain_sf (IPR035979) - T[21-127] 4.97E-25
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[34-125] 4.8E-26
ProSiteProfiles
RRM_dom (IPR000504) - T[43-120] 16.398
SMART
RRM_dom (IPR000504) - T[44-116] 1.3E-21
Pfam
RRM_dom (IPR000504) - T[45-102] 1.1E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RBM38_HUMAN 63.636 % 182 1.47E-56
RBM24_HUMAN 64.151 % 186 4.78E-58





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