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  1. Clone 'cien49061' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'KH2012:KH.C3.217.v1....' > 
  4. Transcript 'KH2012:KH.L9.10.v1.A...' > 
  5. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S204.g03266.04.t

Possible name(s)

MSI1; RBM24; RBM38

Gene model

Haaura.CG.MTP2014.S204.g03266

Location

S204 [20,937 / 32,578]

Sequences

Amino acid sequence

Length: 190

>Haaura.CG.MTP2014.S204.g03266.04.p
MTSAATTNFFTNTAAVPAGHQMINSAGKPVNMTYHTQKDTTFTKIFVGGLPYHTNDASLR
KYFEQFGEIEEAVVITDRMSSCSKGYGFVTMTDKAAAERACKDPNPVIDGRKANVNLAYI
GAKPRSLQTTQPGAIVRQGAYAQYVQPIQQSPFGLIRFSWARSVKCCRYSNTKKQLLALD
LTLVGKSAN*

Nucleotide sequence

Length: 2,097

>Haaura.CG.MTP2014.S204.g03266.04.t
GGAGAGTCTAAATCTCAGGAGGAAAAACAAATGAAGAGAAATACTAGACGTTGTTTGAGC
AGTGGCGCTTTTTCATTCGGGAGAATTGAAACCGAGGACATAGCCTACTGTGTTAGGCGT
CTTCTTCTACTTCAGCAGAAGGTTAAGGGATTTATATTTATCGTTTACTCAATTTCGTAT
CTTACTGTGGAGATGAATGTTAATATAGCAAGAGGGCCCAGATTTGGTGAAGTACTCTAT
TGGGTTAACTTGTATGTAGATCAAACGAATAATTCGTTGATCCCGATCTCCTGAGATTAC
GCAAAGAAGATCTGTTGCTATGCACGATCTGTTTCCGGACAACTGCTCTTAGCGCCCATT
CTAACTCCGAATAAAATCAATCAACGATTTTTCCTTTTTCGTTCCCTAAACAAATCAAAA
TTACCACCCAAATAGCTCAACACATCTCCACGGTCCCTACATCGAAATATCGAGTCTAAA
AGCCTTCCAACTAATTTAGCCGACGAACAGACGACGACGAATCTTACGAACGTATCCAGT
GACGAAGCAGCACGCTCTTCTTCCTGGCCTTCACAATTGAAGGCAGTCGAGCGGAACGCA
GCCACTGTGGAGAGTTTAACTAGAAAACGCAGGGCTAGCCCTAACACGTTACAATTGGAA
AATTCTTGTGACTCAATCGCAACGCTCATAGGGAACACCTCATCAAACAACTGTATACAG
ACGGAGCTCGAAGAAAACGCAAAGAAATTTCGCATAATCTCGGAAGCGAACGCTATCACC
ACAGCTGTTAACCACGTGCCTGCAATAGGCCACCGCACTGCGATTGATCCGACAGCTCTT
TCAGCGAGAGGTATCGTGGTAATACCTAGTTCTCATCAAGCCGCAGCGATTCGACATCCT
TCCATTGCCAACCAATATTTCTTAGGTTCGAATCCATCTACAGCAAACAGCAACGGTCTA
CTCTGTGCCCAGCCCTCACCTATCGGTCCTCAATCTTACCAGATACAGACACCCTCGGGA
GCGACAGTACTTGTGCAGCAGTCTCCCCACACTCAATCAGTGCTACCAGTTCAAACTCAG
GCACAAGTGGCAGTTCCCATGACAAGCGCAGCTACTACAAACTTTTTTACGAACACGGCC
GCTGTTCCTGCTGGTCACCAGATGATTAACAGTGCTGGAAAGCCGGTGAACATGACATAT
CACACGCAAAAAGACACAACTTTTACCAAAATATTCGTCGGAGGTCTTCCATATCACACG
AACGATGCTTCCCTGAGGAAATATTTCGAACAGTTCGGCGAGATCGAAGAAGCGGTGGTT
ATTACTGATAGGATGTCGTCATGTTCGAAAGGATACGGATTTGTAACAATGACAGACAAG
GCTGCCGCGGAGAGGGCATGCAAGGACCCGAATCCCGTGATTGATGGTAGAAAAGCAAAC
GTGAACCTAGCGTACATCGGTGCCAAACCAAGAAGCTTACAGACCACTCAACCAGGTGCC
ATCGTCCGACAAGGTGCCTATGCGCAGTATGTACAGCCGATTCAGCAATCACCGTTCGGA
TTAATCCGTTTTTCTTGGGCCCGCAGCGTCAAATGCTGTCGTTATAGCAACACTAAAAAG
CAACTTCTAGCGCTAGACCTCACACTAGTGGGAAAATCCGCGAACTAGGGTTTCTACTGA
ATGCGTTCCGCTTTCACACCATCGTAAGTCGAGCCGTCGTTAAACAGGGACCGTTTGCAT
AACCTGCGCGCTGTTGAGGTCCTATTTGCCCATAGATATATGTCCTTTTGAAGAAGCTGA
ACCACATTGCTTGATGTTTATTCACCATGCAACTTCATCACACCAAATATTTGATTTATC
ATGGAAAGGTAATTCTCAAGGAATTTAGCGACACTTACAAGAGCTGTCCTGTGAACAAGC
CATACGTGAATACAACTCCCTCTAACACGTGTTTGTCCGTAGGTCCGCCATAAAAAAATA
AATTTCACCTTGGGGTGTTCAATTAAAAGTTCATCAAACATGCTCGATGATTCTCTAACC
ACGCTAACTGCCGAAAAAAGGCGCCATTATGCTTTACAACCTATCATCACTATCTGA

InterProScan

SUPERFAMILY
RBD_domain_sf (IPR035979) - T[21-127] 1.48E-25
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[33-126] 1.5E-26
ProSiteProfiles
RRM_dom (IPR000504) - T[43-120] 16.398
SMART
RRM_dom (IPR000504) - T[44-116] 1.3E-21
Pfam
RRM_dom (IPR000504) - T[45-102] 4.5E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RBM38_HUMAN 86.17 % 179 3.31E-57
RBM24_HUMAN 71.901 % 173 7.57E-55





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