Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 682

>Haaura.CG.MTP2014.S219.g03408.01.p
MFENEDWDIDEVGAGDKSNSSAFESKSNSAFGGNFNRGHGNEENRNGFGSGDYPSSNSFG
NTDFRQERGRGRGIDNSAGKGKSRGCFKCGEDGHMARDCPSGTSSGFGGGGGKSRGCFKC
GEDGHMARECPSDTSSGFGGGGGRSRGCFKCGQDGHMARECPSGESSGFDGSTKGKGSYK
HGDGENNSDRPPIYIPPPPPEEEELMFSTVQSGIHFDNYDTIPVEVTGENPPGGISSFDE
ADLPDTVRKNVKKSNYKKPTPVQKYSIPIVNSDRDLMACAQTGSGKTAAFLLPVLRGILM
KEKEKKVTNAMFSEKQFPQAVVVGPTRELVSQIFLETRKFSKDTIIKPVVAYGGTSVADQ
LSKLSRGCNILIATPGRLLDFINRGRVGLENLQYLILDEADRMLDMGFEPEIRRLVAMPD
IPDKYKRHTLMFSATFPNNIQELAHDFLRDDFLFLTVGRVGGACSDVTQTVLQVDNNDKR
ETLMQLIADVEETKAKTLVFVDTKRNADFLACFLSQEGYPTTSIHGDRLQREREQALYDF
KSGVCPILVATSVAARGLDIPKVEHVINFDLPSEIDEYVHRIGRTGHCGNLGQATSFYCD
DKDGALARTLVKILADSQQEVPGWLENCAESAVGTSFGAGRGQFGARDARKAGFGGAQTS
RQTTDCDYNDGGGASTKQQSGF

Nucleotide sequence

Length: 2,046

>Haaura.CG.MTP2014.S219.g03408.01.t
ATGTTCGAGAATGAAGATTGGGATATTGATGAAGTTGGTGCGGGAGACAAAAGTAATTCC
TCTGCATTTGAATCAAAATCTAATTCCGCATTCGGAGGAAATTTTAATCGGGGCCATGGA
AATGAGGAAAATCGGAATGGATTTGGTTCTGGCGATTACCCTTCCAGCAATAGTTTTGGC
AATACAGACTTCAGACAAGAAAGGGGAAGAGGAAGAGGAATAGACAATTCAGCGGGAAAG
GGAAAAAGCAGAGGATGCTTCAAGTGTGGTGAAGACGGCCACATGGCAAGAGACTGCCCT
TCAGGTACATCTTCAGGATTTGGTGGAGGAGGGGGAAAAAGCAGAGGATGCTTCAAGTGT
GGCGAAGATGGCCACATGGCACGAGAATGCCCTTCAGATACATCTTCAGGATTTGGTGGA
GGAGGGGGAAGAAGCAGAGGATGCTTTAAATGTGGCCAAGATGGCCACATGGCACGAGAA
TGCCCATCCGGGGAATCCTCAGGATTTGATGGTTCAACGAAGGGCAAAGGAAGCTATAAA
CATGGTGATGGAGAAAATAATAGCGATAGACCGCCGATATACATACCTCCTCCACCGCCA
GAGGAAGAGGAATTGATGTTCTCCACTGTGCAAAGCGGAATTCATTTCGATAATTATGAC
ACAATACCGGTAGAAGTCACAGGAGAAAATCCTCCAGGGGGCATATCGTCTTTCGACGAA
GCCGACCTGCCTGACACTGTGCGGAAAAACGTCAAGAAATCAAATTATAAAAAACCTACG
CCCGTGCAGAAATACAGCATACCGATCGTGAATTCTGATAGGGATTTAATGGCTTGTGCT
CAAACGGGCTCTGGGAAGACAGCAGCTTTCCTTTTGCCGGTTCTTCGTGGAATTCTAATG
AAAGAAAAAGAAAAGAAAGTAACTAATGCCATGTTTTCTGAAAAACAATTTCCACAGGCT
GTTGTAGTTGGCCCTACAAGAGAACTCGTGTCACAGATTTTTCTGGAGACTAGAAAATTT
TCCAAGGACACGATCATAAAACCAGTTGTTGCATATGGAGGAACCAGCGTAGCAGATCAG
TTGTCAAAGCTGAGTCGAGGATGTAATATCCTCATAGCTACTCCTGGACGCCTCCTCGAT
TTTATCAACCGAGGTAGAGTTGGCCTGGAAAATTTGCAGTATCTGATACTAGACGAAGCT
GACCGGATGCTTGACATGGGATTTGAGCCGGAAATAAGGCGGCTTGTTGCGATGCCGGAT
ATCCCAGATAAGTACAAACGTCATACCCTCATGTTCAGTGCCACATTCCCGAACAACATT
CAGGAGTTGGCCCATGATTTTCTTCGAGACGACTTTTTGTTTCTGACTGTTGGTCGCGTG
GGTGGAGCTTGTTCTGATGTGACGCAAACTGTCTTGCAAGTGGACAACAATGATAAACGA
GAAACACTGATGCAGTTAATTGCCGATGTGGAGGAAACTAAAGCGAAAACTTTGGTTTTT
GTTGATACAAAACGCAATGCTGATTTCCTAGCATGCTTTCTTTCTCAAGAAGGCTATCCT
ACTACGAGCATTCATGGAGACAGACTGCAGAGAGAAAGAGAACAGGCATTGTATGATTTC
AAAAGTGGAGTCTGCCCTATTCTCGTTGCTACTTCTGTTGCTGCTCGAGGATTGGACATA
CCGAAAGTGGAGCATGTCATAAATTTTGATCTGCCGTCGGAAATAGACGAATACGTTCAT
CGTATCGGGCGTACCGGACACTGTGGAAATTTGGGTCAAGCAACGTCTTTCTATTGCGAT
GACAAAGACGGTGCTCTTGCAAGAACACTGGTTAAAATCCTTGCTGATTCACAACAGGAG
GTGCCAGGCTGGTTGGAAAACTGTGCAGAGAGCGCTGTAGGAACCAGCTTCGGAGCTGGC
AGAGGACAGTTTGGAGCTCGTGATGCCAGAAAAGCGGGATTTGGTGGTGCACAAACTTCT
AGACAAACCACTGACTGCGACTATAACGACGGCGGTGGTGCAAGCACAAAGCAACAGTCG
GGCTTC

InterProScan

SUPERFAMILY	Znf_CCHC_sf (IPR036875) - T[78-133] 1.24E-11 - T[139-164] 1.34E-6
Pfam	Znf_CCHC (IPR001878) - T[84-101] 2.0E-7 - T[115-132] 5.1E-7 - T[146-163] 5.2E-7
SMART	Znf_CCHC (IPR001878) - T[85-101] 4.7E-6 - T[116-132] 1.1E-5 - T[147-163] 8.6E-6
ProSiteProfiles	Znf_CCHC (IPR001878) - T[86-101] 11.581 - T[117-132] 11.383 - T[148-163] 11.416
ProSiteProfiles	RNA_helicase_DEAD_Q_motif (IPR014014) - T[236-264] 11.72
SMART	Helicase_ATP-bd (IPR014001) - T[255-470] 4.7E-57
Pfam	DEAD/DEAH_box_helicase_dom (IPR011545) - T[260-443] 8.2E-48
ProSiteProfiles	Helicase_ATP-bd (IPR014001) - T[267-454] 31.314
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[318-602] 5.57E-71
ProSitePatterns	RNA-helicase_DEAD-box_CS (IPR000629) - T[396-404] .
CDD	Helicase_C (IPR001650) - T[466-597] 2.27399E-38
Pfam	Helicase_C (IPR001650) - T[478-587] 5.4E-29
ProSiteProfiles	Helicase_C (IPR001650) - T[482-629] 22.957
SMART	Helicase_C (IPR001650) - T[508-589] 3.2E-29