- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S219.g03409.01.t
Possible name(s)
PUF60; U2AF2
Gene model
Location
S219 [51,666 / 55,357]
Amino acid sequence
Length: 523
>Haaura.CG.MTP2014.S219.g03409.01.p
MYAVWSEFVTFVWTRFGRKYFYESVEYSKNPPQLHSDIIMSAPDEDYKNGGGDYPAQSEK
KPKTDYNEDPERQDRKRRERSRDPDRRRESRDRDRGRVNRNRDQRKKSPSRKRPNSHSKK
RSRSKSRERNVKKKKQYKYWDVAPAGFEHLTPLQYKAMQAAGQIPLMATTPSLGSANVAV
PGATAPLPGNQMTRQPFYLFQARRLYVGNIPFGVTEDAMMDFFNHQMTLSGLAQAPGNPV
LAVQINLDKNFAFLEFRSVDETTQALAFDGINFMGQSLKIRRPSDYKPLPGSLETPSVHL
PGVVSTVVQDSLQKIFVGGLPNYLNEDQVKELLTSFGPLRAFNLVKDSATSLSKGYAFCE
YVDCQITDQAIAGLNGMQLGEKKLIVQRASVGAKGGIMNMLQTPVTLQVPGMVTAGQQGP
VTEVICLLNMVTEEELKEDEEYDDILEDVRDECNKLGSVKSLEIPRPVPGTDVPGVGKIF
VEFDNATDAQNACNALSGRKFANRVVVTSYYDPDLYHRREFD*
Nucleotide sequence
Length: 1,569
>Haaura.CG.MTP2014.S219.g03409.01.t
ATGTACGCTGTATGGAGCGAATTCGTGACGTTTGTATGGACTAGATTTGGTAGAAAGTAC
TTTTACGAATCTGTTGAATATTCGAAGAATCCACCACAGTTACACTCGGATATCATCATG
TCTGCACCAGATGAGGATTATAAAAATGGCGGCGGGGATTATCCTGCCCAATCCGAAAAG
AAACCTAAAACAGATTACAACGAAGATCCTGAACGCCAGGATCGGAAACGCAGAGAAAGA
TCGAGAGATCCTGATCGCAGAAGGGAAAGCCGGGATCGAGACAGAGGCAGGGTGAACAGA
AATAGAGATCAGAGAAAAAAAAGCCCCAGTCGTAAAAGGCCCAATTCTCACTCGAAGAAG
CGCAGCCGCTCCAAAAGTCGGGAACGAAATGTGAAGAAAAAGAAGCAATATAAATACTGG
GACGTTGCACCAGCTGGTTTCGAACACCTAACACCATTGCAATATAAGGCAATGCAAGCA
GCAGGACAAATTCCTCTCATGGCTACAACACCCAGCTTGGGAAGTGCCAACGTGGCAGTT
CCGGGTGCCACGGCTCCTTTGCCAGGCAATCAAATGACACGACAGCCATTCTATCTCTTC
CAAGCACGTCGTTTGTATGTTGGCAATATCCCGTTCGGTGTCACGGAGGATGCTATGATG
GATTTCTTCAATCATCAAATGACTTTGTCTGGTTTAGCACAAGCCCCTGGCAACCCTGTT
CTGGCCGTCCAAATCAACCTTGACAAAAATTTCGCCTTTCTTGAGTTTCGTTCGGTAGAT
GAGACAACACAGGCTTTAGCATTCGATGGAATCAATTTCATGGGGCAATCCCTGAAAATT
CGTCGTCCGAGCGATTACAAGCCATTACCGGGATCACTCGAGACTCCATCAGTGCATTTG
CCAGGAGTTGTATCGACAGTTGTACAGGATTCACTTCAGAAGATATTTGTGGGTGGTCTT
CCGAATTATCTGAACGAAGATCAAGTCAAAGAATTGCTGACGTCTTTTGGACCGTTGCGT
GCATTCAACTTGGTGAAAGATAGTGCCACTTCGTTGTCTAAAGGTTATGCATTCTGTGAG
TATGTGGATTGCCAGATAACAGATCAAGCTATCGCTGGCCTCAATGGAATGCAGCTCGGT
GAAAAAAAGCTAATCGTGCAACGTGCGAGTGTCGGCGCGAAGGGTGGCATCATGAATATG
CTGCAAACCCCTGTCACATTGCAGGTTCCTGGAATGGTAACTGCGGGACAACAGGGCCCT
GTTACAGAGGTTATTTGCCTACTTAATATGGTAACAGAAGAGGAACTGAAGGAAGATGAG
GAGTATGATGACATACTCGAAGACGTCAGAGACGAATGCAACAAACTTGGATCGGTGAAA
AGCCTTGAAATTCCTCGTCCGGTGCCTGGAACCGATGTCCCGGGCGTCGGAAAGATCTTT
GTAGAATTTGACAACGCCACCGATGCACAAAATGCATGCAATGCTCTGTCTGGAAGAAAG
TTTGCTAACAGAGTTGTGGTCACATCTTACTACGATCCTGATCTTTACCACAGAAGAGAG
TTTGACTGA
| TIGRFAM |
U2AF_lg (IPR006529) - T[72-521] 2.6E-146 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[203-288] 8.6E-61 - T[289-292] 8.6E-61 - T[313-364] 8.6E-61 - T[365-386] 8.6E-61 - T[419-522] 7.6E-33 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[203-287] 7.12E-19 - T[314-401] 1.29E-27 - T[430-514] 1.29E-27 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[203-285] 13.891 - T[313-391] 15.374 - T[423-513] 9.286 |
| SMART |
RRM_dom (IPR000504) - T[204-281] 2.1E-12 - T[314-387] 7.3E-17 - T[425-509] 0.39 |
| Pfam |
RRM_dom (IPR000504) - T[205-279] 4.7E-6 - T[315-384] 1.4E-15 - T[447-506] 7.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U2AF2_HUMAN | 71 % | 551 | 0 |