Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S2212.g09379.01.t

Possible name(s)

MOSPD2; VAPA; VAPB

Gene model

Haaura.CG.MTP2014.S2212.g09379

Location

S2212 [10,744 / 14,643]

Sequences

Amino acid sequence

Length: 183

>Haaura.CG.MTP2014.S2212.g09379.01.p
MSRHKQPQVLKINPPTELKFRGPFKDVVTSQLTLSNPTDKKVCFKVKTTAPRRYCVRPNS
GIVEPSSKVNVSVMLQPFDSDPNELMKHKFMVQTMYAPEVVEDMETLWKETQPVDLMDSK
LKCVFEQPDVEEISSVPAKTEDSGTEQNEPGSELQSIMEEYRRLQSENAKLKLQNEEMKI
TS*

Nucleotide sequence

Length: 947

>Haaura.CG.MTP2014.S2212.g09379.01.t
ATGTCTCGTCATAAGCAACCGCAAGTATTGAAGATCAATCCTCCGACAGAGTTAAAGTTC
AGAGGTCCTTTCAAGGATGTTGTGACGTCCCAACTGACACTGTCGAACCCGACAGACAAA
AAAGTTTGCTTCAAGGTCAAGACAACGGCGCCACGAAGATACTGCGTCAGACCGAACAGT
GGGATCGTTGAGCCGAGCTCAAAGGTCAATGTTTCTGTGATGTTGCAGCCGTTCGATTCA
GATCCAAATGAGCTGATGAAACATAAATTTATGGTACAAACGATGTATGCTCCCGAAGTA
GTGGAAGACATGGAAACCTTGTGGAAAGAAACTCAGCCTGTGGATCTCATGGATTCCAAA
TTAAAATGTGTGTTTGAGCAACCAGATGTTGAGGAGATATCTTCTGTGCCTGCAAAGACG
GAAGACAGTGGAACGGAACAGAACGAACCAGGATCGGAACTACAATCAATTATGGAGGAA
TACAGGAGATTGCAATCTGAGAACGCAAAACTCAAACTTCAAAACGAAGAAATGAAGATT
ACCTCGTAGTTTGCAGTTATTGCACCTATTTTGTAACATTTATAATGTCTAGTTATAATA
TTTATAATGCCTTTTGATAATGTATTTGTGTCTTTTTCGAGCTTCATCGAGTCAAGGTTC
TCTTCTCACTCAGCAGAAACGTCTCATACTTATATTCTTATTGATCGCATTCGTGACCGG
GATCACGCTTGGATACATAATGTCATAAATGATCAACGCATCCGTATCGGCGCAGAAAGA
AAATTCTGCTAGAAACGTTCTTTTTTGGAAATTTGTAAAAAAAAATTAATGTTCAAAAAT
ATCAATTCCGTTGCATGTCCACAAATTTTGTCCGAGAATTCACCGGATTCCAGATTTTCT
GGCATTTCGAACAAATGTTCTTGCTGCCTGTTGTGAAACTAACTATT

InterProScan

Gene3D	Ig-like_fold (IPR013783) - T[1-127] 4.0E-53
PIRSF	VAP (IPR016763) - T[3-181] 6.7E-54
SUPERFAMILY	PapD-like_sf (IPR008962) - T[6-133] 6.8E-40
PANTHER	VAP (IPR016763) - T[7-179] 3.1E-65
PANTHER	VapB (IPR030226) - T[7-179] 3.1E-65
ProSiteProfiles	MSP_dom (IPR000535) - T[9-126] 32.219
Pfam	MSP_dom (IPR000535) - T[10-110] 1.6E-31

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VAPA_HUMAN	54.688 %	208	1.65E-68
VAPB_HUMAN	56.452 %	206	8.45E-68