Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S224.g03456.02.t

Possible name(s)

BMP2; BMP3; GDF10

Gene model

Haaura.CG.MTP2014.S224.g03456

Location

S224 [69,118 / 71,330]

Sequences

Amino acid sequence

Length: 557

>Haaura.CG.MTP2014.S224.g03456.02.p
LLNTCSPYDMTATMILCSIAADPRFREKDRGRPVIIVPVVERDGGPKGALGREVRNGFQP
DNRMPAFLFNLSSIPSEEELVSVEIRLDGRAKNYRSNFPSFQQDGGLGSDEANNTHPSSW
NLKIGVYKIGRISCRDEIDCSADDISKIFIKVGRTVVISSPAITTWSDKELVLLARKARK
LDHVMLVKFTRDPSAPNNTEELSRSSRHIKKPSENGNEQHHTSKDLPNTFTVPESERPKR
NSDRTKSLASAQPFLSEPSQFGKDFNALDLLDSEFDITQVPMLIIYSNDSRTVEATEAPQ
ISPLIWGALENVTASLTRRTRRSIDNISEMEENQLPEAAGVDDTREYDPNIMQTESDKRR
RPFVVKKGKAQNRQTKRINNSLSNDQTELHDNEKSRRLLMDTLKDKRRRRKNKKCEDRKG
RRRKGCRKGKKGKGKNIPPHESLEALNRAHLLCGRRSLHVDFADIGWSDWIISPNYFDAY
YCSGRCEIPHMQSMQGTSNHAIIQALIKAIGVNKEIPAPCCVPEKLMSLSVLYYDEEKNV
VLKVYRNMSVETCSCR*

Nucleotide sequence

Length: 1,671

>Haaura.CG.MTP2014.S224.g03456.02.t
TTGTTGAACACCTGTTCGCCATACGATATGACAGCCACGATGATTCTTTGTTCTATTGCA
GCTGACCCACGTTTTCGGGAAAAGGACAGAGGACGACCAGTGATTATTGTACCTGTTGTA
GAAAGAGATGGTGGGCCAAAAGGAGCCTTGGGTAGGGAAGTGAGAAATGGTTTCCAACCG
GACAACCGAATGCCCGCTTTTCTGTTCAATTTGAGTTCCATACCGAGCGAAGAAGAACTG
GTTTCTGTAGAGATACGTCTAGACGGACGAGCCAAGAATTACCGCAGCAATTTTCCCTCA
TTTCAACAAGACGGGGGTTTAGGGAGTGATGAAGCGAACAACACGCATCCGTCCTCTTGG
AATCTAAAAATTGGAGTGTACAAAATAGGACGAATTAGCTGTCGAGACGAGATCGACTGC
AGTGCGGATGACATATCGAAAATTTTCATCAAAGTTGGAAGAACTGTTGTGATCAGTTCG
CCAGCGATAACGACTTGGTCTGACAAAGAGCTCGTTCTCCTTGCTCGGAAAGCCCGTAAG
CTCGATCATGTCATGTTGGTCAAGTTTACGCGAGATCCCTCTGCGCCTAACAACACAGAA
GAACTTTCTCGTAGTAGCAGACATATAAAGAAACCATCGGAAAATGGCAATGAACAACAT
CATACATCAAAAGATCTACCGAATACATTTACCGTTCCCGAAAGCGAACGACCAAAACGG
AATAGCGACCGTACGAAATCGCTTGCTTCTGCCCAACCATTTTTATCCGAGCCTTCACAA
TTCGGAAAAGATTTCAATGCATTAGATTTACTAGATTCGGAGTTTGACATAACCCAGGTA
CCCATGCTGATAATCTATTCCAATGACTCCCGCACGGTGGAAGCAACGGAAGCTCCACAA
ATTTCACCACTCATATGGGGAGCTTTGGAGAATGTTACAGCATCTCTAACGAGAAGAACA
AGGCGTTCCATCGACAATATATCAGAAATGGAAGAAAACCAATTGCCGGAGGCGGCAGGT
GTAGACGACACCAGGGAGTACGACCCCAATATAATGCAAACAGAGTCAGACAAGAGACGG
AGGCCGTTTGTGGTAAAAAAAGGGAAAGCTCAAAATCGCCAAACGAAACGTATAAATAAT
TCTCTATCCAACGACCAAACGGAACTTCACGATAACGAAAAATCGCGTCGCCTCCTAATG
GACACGTTAAAGGACAAACGTCGCCGTCGAAAAAACAAGAAATGCGAAGATCGTAAAGGG
AGACGTAGAAAGGGTTGCAGAAAGGGAAAGAAGGGCAAAGGAAAAAATATTCCACCACAC
GAATCTCTGGAAGCCCTCAATCGCGCCCATTTACTCTGCGGTCGAAGGTCGCTCCATGTT
GATTTCGCTGACATCGGTTGGTCAGATTGGATAATCTCCCCCAATTACTTCGACGCATAT
TACTGTTCTGGACGATGTGAGATACCGCATATGCAGTCCATGCAAGGAACCTCTAATCAC
GCCATTATCCAAGCTCTCATCAAAGCTATCGGGGTAAATAAAGAGATTCCAGCCCCGTGC
TGTGTTCCTGAAAAACTCATGTCTTTAAGCGTTCTGTATTATGATGAAGAGAAGAATGTT
GTTCTGAAAGTTTATAGAAATATGTCCGTAGAAACCTGCTCGTGTAGATGA

InterProScan

PANTHER	TGF-beta-rel (IPR015615) - T[66-556] 4.8E-54
ProSiteProfiles	TGF-b_C (IPR001839) - T[433-556] 35.678
Gene3D	Cystine-knot_cytokine (IPR029034) - T[444-556] 4.2E-36
SUPERFAMILY	Cystine-knot_cytokine (IPR029034) - T[449-556] 5.59E-33
Pfam	TGF-b_C (IPR001839) - T[453-555] 9.1E-32
SMART	TGF-b_C (IPR001839) - T[453-556] 2.0E-50
ProSitePatterns	TGFb_CS (IPR017948) - T[471-486] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
BMP3_HUMAN	34.965 %	160	3.58E-43
GDF10_HUMAN	61.905 %	152	3.16E-40
BMP2_HUMAN	43.939 %	120	8.71E-30