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TRANSCRIPT CARD

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  1. Clone 'ma157i17' > 
  2. Transcript 'KH2012:KH.L35.11.v2....' > 
  3. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S225.g03470.01.t

Possible name(s)

DHCR7; LBR; TM7SF2

Gene model

Haaura.CG.MTP2014.S225.g03470

Location

S225 [69,951 / 74,299]

Sequences

Amino acid sequence

Length: 542

>Haaura.CG.MTP2014.S225.g03470.01.p
EVSKRSMKIRFPVGEKVMAKWPGSALYFHAIVTKVTEEEGTVEVRFEDGTDMELPAHYVS
SESVFTKKKSPARRRSRSRSPGRSPGRQKKLTNLKKDKDDKEEVKKVQVTSEPVTFTTRR
IRKYESEQKTNVHGLQQTINKSYKAEVVVERTESPSVQEMAKQSKVKTKQVKKSEKKEYR
EFGGPFGVFFMYLTVPILPLVVITSCTENMCEVGKFTMDTIPRKLKYYFDIESVLILLGF
LLFHAIIYAIPFGYIADGPNTPSGKKIQYRISAFFTLFFTAVAYSALIFYKFPVTIVYDK
MLQIAAVTTVFCYLANILIHIKSFSAPPSELNPHGSTGCTIYDMFLGRELHPRFGKYFDL
KLYLYRPAMTGWILVDLIYLQKELESTGAVRPLLVALIASQIIYCIAVFFWDEEQCPYMF
DVKNEGAGFLQLFGELVIVPFVYTIQPRYILEHHSAAKPSATIYALFGLLFLLGFILVIG
SGYQKFKFRKNPYDPQVSGFESLPPSKKGGDRLLISGFWGFLRHPNYLGEIIIGISWGLT
M*

Nucleotide sequence

Length: 1,824

>Haaura.CG.MTP2014.S225.g03470.01.t
GAGGTCAGTAAACGCAGCATGAAAATTCGGTTCCCTGTTGGAGAGAAAGTTATGGCGAAA
TGGCCTGGAAGTGCATTGTACTTTCACGCTATTGTCACAAAGGTAACAGAAGAAGAAGGA
ACAGTAGAAGTTCGTTTTGAAGACGGTACTGATATGGAGTTACCAGCTCATTATGTATCT
AGCGAAAGTGTCTTCACAAAAAAGAAATCTCCTGCTCGACGTAGATCTCGATCAAGATCT
CCTGGTAGAAGCCCGGGTAGGCAAAAAAAGCTTACTAATCTGAAAAAGGACAAAGATGAC
AAAGAAGAGGTCAAGAAAGTGCAGGTTACATCTGAACCAGTGACCTTTACCACTCGCAGG
ATAAGGAAATACGAGTCTGAGCAAAAAACTAATGTACACGGCCTGCAGCAGACTATCAAC
AAGTCTTACAAGGCTGAAGTAGTTGTAGAGAGAACAGAGAGTCCTTCGGTGCAAGAAATG
GCCAAACAATCAAAGGTGAAAACCAAGCAGGTGAAGAAGTCAGAGAAAAAAGAATACAGG
GAATTTGGTGGCCCGTTCGGAGTCTTCTTCATGTACCTGACTGTCCCCATCCTACCTCTT
GTGGTCATCACTTCGTGTACGGAGAATATGTGTGAAGTAGGAAAGTTCACCATGGACACA
ATTCCTCGAAAATTAAAGTACTACTTCGACATTGAATCGGTTTTGATACTGCTTGGCTTT
TTGCTATTTCACGCCATCATATACGCCATACCATTCGGGTACATTGCTGACGGACCTAAC
ACTCCTTCCGGGAAGAAAATCCAGTATAGAATAAGTGCGTTCTTCACTCTGTTCTTCACC
GCAGTCGCATACAGTGCTTTGATTTTCTACAAATTTCCTGTCACAATTGTGTATGACAAA
ATGTTGCAAATTGCAGCTGTGACAACAGTGTTTTGTTACTTAGCAAATATCTTGATCCAC
ATTAAGTCTTTCTCTGCCCCTCCATCTGAACTGAATCCTCACGGCAGCACCGGATGCACA
ATATACGACATGTTTCTTGGACGAGAACTCCATCCGCGATTCGGAAAATACTTTGATCTG
AAGTTGTACTTGTACAGGCCTGCTATGACTGGTTGGATATTGGTGGACCTCATTTATCTG
CAAAAGGAATTAGAATCAACCGGAGCAGTTCGACCATTGCTGGTTGCTTTGATAGCTTCG
CAAATCATCTACTGCATTGCAGTTTTCTTCTGGGATGAGGAACAATGCCCGTACATGTTT
GATGTTAAAAATGAAGGTGCAGGGTTTCTGCAGCTTTTTGGCGAACTGGTCATAGTACCG
TTTGTGTATACGATCCAGCCTCGTTACATCCTGGAACATCATTCCGCCGCTAAACCTTCT
GCCACCATCTATGCTCTGTTTGGGCTGTTGTTCCTGCTTGGATTTATCCTTGTCATTGGA
TCTGGATACCAAAAGTTCAAGTTCCGAAAAAACCCTTATGATCCACAAGTGTCAGGTTTC
GAGAGCTTACCACCATCTAAGAAAGGTGGAGACAGGCTTCTTATTTCTGGATTCTGGGGG
TTCCTGAGACATCCGAACTACCTCGGTGAAATTATCATTGGCATTTCGTGGGGACTTACC
ATGTAAACCAACTATGGATTTTACTACAGGATTCAACCAGATTGTGCCCTGGGTCTACGC
CTTGTTCGTCACCGGTATCTTGTTACATCGCTCTTTGAGAGACGAAGTAAGGTGCAAAGA
AAAACACGGTTACGCATGGAACGAATACTGCAAACGAGTGCCATATCGCATCATACCTTA
CGTCTTTTAATGTTTCCTGACACT

InterProScan

SMART
Tudor (IPR002999) - T[9-67] 6.1E-4
Pfam
Lamin-B_rcpt_of_tudor (IPR019023) - T[10-56] 9.2E-13
Pfam
Ergosterol_biosynth_ERG4_ERG24 (IPR001171) - T[177-540] 9.3E-62

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DHCR7_HUMAN 28.333 % 104 5.73E-24
ERG24_HUMAN 34.228 % 186 2.94E-53
LBR_HUMAN 28.12 % 243 6.18E-73