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- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S227.g03487.01.t
Possible name(s)
ANK1; ANK2; TRPA1
Gene model
Location
S227 [23,816 / 37,972]
Amino acid sequence
Length: 1,282
>Haaura.CG.MTP2014.S227.g03487.01.p
MVTMDDNPIEIKVISSSKQRKQCDREDYDNNEISEEAVTSSTSFLKDGSLSKSPEGTNTK
RSRSSSMIQAVFSAMRISRKDSGKSLNGSVVGTPLSSRHEISSSSERCKKSPATKRQMWA
ITRFTEKTNKIEGDSTSSAPLVGEICLMSDGPNYIFKLADKGDDKQIAILCNARPERLLS
RDLKGATILHHAAANGRTKVMDFVFADQQGPTLLDSQDDKNATPLHWAVSGDNEIGVEYL
LSRGANPTIANNNGECPIHTCVQVESVKAMKTLIKHKGIINLNEKQTTCGKTALHIAAVV
DNEEITRLLLGAGAKPCIGCNLGYRPLHYAALNGSLKVMEVILERCQTSGYTREQILSFS
DKEFCSALHCAVTGGNIDTIKMCLSYGARLDKQQADLSTPMHVVCSQGAFDIVKQMFELA
KEQAIKTMSLQDKQRHTPLHKAAMYGHAVIIRYLVEQGANMDILDGDQNSPLLLAASRGN
WDCVHHLIELGSSLLLKNSDDRNLMHMIVLKGGDIRELETKYGDQPLPFLSDKCKSILSS
CDVLHLLNDADSFGCTPLHYACQEGNLASLDTLMKLGVSAKPKSTGSQSPLHFATMYGRY
NACKRLINSPQGPNIINEKDSSGMTPLHFAAQNGHIKVVKLLLNKGAVFHRTSYGRSVLH
VAAESGYTRTILILIEMNKTLLDQTDEEGDTALHIACRSHQVNTAGLLLDLNASILRNKQ
GTTCFSEAIRNGNREVALAIVEHDRWEEAMQTCCRSENYPSVPTTLLIQYLPDIWVVAMN
RCIKTADTNPKSKDFWIKYQFKYLQPNVNNRDEVKRTIKALLNADSKSKAESSLVVALPA
LNKMVQFNRVDCLRHPVSVAYLRMKWNAYGRWVHGLNLFIYILGLFPLTYLICTMDSNPH
DDSNLNSTSTTIHREPLQFTAFQYTMMILLTILSTCQMIKEVIQMIQQKKKYFLDFTNAV
EWILYLDSLLFVVPFFTGYSVHWQFECGAIAILLAWFNLLLFLRRFDLAGIYVVMFLEIF
KTLIKVIIVFSFMLVAFSLSFFVLMRHENDKAFKNPGLAFMRIFTMTLGEMGYTEGFLEP
YVDDDPNTLHFPVTSMILLIVFILVMPILLMNLLIGLAVGDIAEVQNNASLQRLAMQVQL
HTDIEGKLSTRVLRHVDKEELIIYPNGSRSHYNKFWNFIEQSSIIENCTETVTKADRNIN
YLNLEIQKQKHRIKGIQSSLSKQHDLLRLIVQKMEIRSEADDQDEGLGSEIQRRLQSNRS
RIASNVGSKIMAVRAFKSVLQ*
Nucleotide sequence
Length: 3,846
>Haaura.CG.MTP2014.S227.g03487.01.t
ATGGTCACGATGGACGACAACCCTATAGAAATTAAAGTGATTAGCAGCAGCAAACAAAGG
AAACAATGTGATCGGGAAGATTACGATAATAACGAGATTAGTGAAGAAGCCGTGACGTCG
AGCACAAGTTTTCTGAAAGACGGAAGCCTCTCGAAATCTCCAGAAGGAACTAACACAAAA
AGAAGCAGGAGCTCTAGTATGATCCAGGCTGTCTTCAGTGCGATGCGCATTAGTAGGAAG
GACAGTGGTAAATCACTGAACGGCAGCGTTGTTGGAACTCCTTTGAGCAGCAGACATGAA
ATATCATCCTCAAGTGAACGCTGTAAAAAGAGCCCTGCTACCAAACGACAAATGTGGGCG
ATAACTCGGTTCACTGAAAAAACGAACAAGATTGAAGGAGATTCTACTTCTTCAGCACCC
CTCGTTGGTGAAATCTGCCTAATGTCTGACGGACCGAATTACATTTTTAAGTTGGCTGAC
AAAGGAGATGATAAGCAGATAGCAATATTATGCAATGCGCGTCCAGAGAGATTGTTATCG
AGAGACTTGAAAGGTGCCACCATTTTACATCACGCAGCAGCAAATGGACGCACGAAAGTG
ATGGACTTTGTATTCGCTGATCAGCAAGGTCCTACTCTGCTAGATAGCCAAGATGACAAA
AACGCCACACCGTTGCACTGGGCAGTTTCTGGAGATAATGAAATTGGTGTCGAATATCTT
CTGTCAAGAGGAGCAAATCCCACGATAGCAAATAACAACGGAGAATGTCCTATACATACA
TGTGTCCAAGTTGAATCGGTTAAAGCCATGAAAACGTTGATTAAACACAAGGGAATTATC
AATCTGAACGAAAAACAGACTACATGTGGCAAAACAGCTTTGCATATAGCAGCCGTTGTA
GACAATGAAGAAATAACAAGACTCCTGTTGGGAGCTGGTGCCAAACCATGTATTGGCTGT
AATTTGGGATATAGGCCTCTACATTACGCAGCGCTGAACGGTTCATTGAAAGTGATGGAG
GTAATTTTGGAAAGGTGTCAGACGAGCGGTTACACTCGTGAGCAGATCCTCTCCTTTAGC
GACAAAGAGTTTTGCAGTGCGCTTCACTGCGCCGTCACCGGCGGAAATATTGACACGATA
AAAATGTGTTTAAGTTACGGAGCTCGACTGGACAAACAACAAGCCGATCTATCGACTCCA
ATGCATGTCGTCTGTTCTCAAGGAGCATTCGATATCGTAAAGCAGATGTTCGAGCTTGCT
AAGGAACAGGCCATTAAAACGATGTCATTACAAGACAAACAGAGACACACACCTTTGCAC
AAAGCTGCAATGTATGGACATGCTGTTATAATTCGTTATCTGGTCGAGCAAGGAGCAAAC
ATGGATATATTAGATGGAGATCAGAATTCGCCATTGCTGTTAGCAGCGTCACGTGGAAAC
TGGGATTGTGTTCATCACCTGATAGAACTAGGATCAAGTCTGTTATTGAAGAACAGCGAT
GACAGAAATCTAATGCATATGATTGTGCTGAAAGGAGGCGATATAAGGGAACTGGAGACC
AAATATGGTGATCAGCCTCTTCCATTTCTTTCAGATAAATGCAAATCAATACTTTCTTCA
TGTGATGTATTGCATCTTCTCAACGATGCTGATTCTTTTGGCTGTACTCCACTCCATTAC
GCTTGTCAAGAAGGAAATCTTGCCAGCCTCGATACTCTTATGAAACTGGGAGTGAGCGCC
AAACCGAAGTCAACCGGTAGCCAGTCGCCTCTTCACTTTGCCACGATGTATGGCAGATAC
AATGCATGCAAGAGATTGATAAACAGTCCGCAAGGACCGAACATCATCAATGAAAAGGAC
TCCAGCGGCATGACACCGTTGCATTTTGCGGCGCAAAACGGACATATAAAAGTAGTGAAA
CTCCTTCTTAACAAAGGTGCTGTGTTCCATCGTACGAGTTACGGGAGATCCGTTCTTCAC
GTTGCAGCGGAAAGTGGCTACACCAGAACCATTCTAATTCTTATTGAGATGAATAAGACA
TTGCTGGACCAAACTGATGAAGAAGGGGATACTGCTCTGCATATTGCTTGTCGGTCCCAC
CAGGTGAACACTGCTGGCCTCCTGCTTGACCTTAACGCTTCTATACTGCGTAATAAGCAA
GGGACCACCTGTTTCTCTGAGGCTATACGAAATGGAAACAGGGAGGTTGCTTTAGCAATC
GTTGAGCATGATCGCTGGGAAGAAGCAATGCAGACATGCTGCAGAAGTGAAAATTACCCG
TCTGTTCCAACTACGCTACTTATTCAGTACTTACCAGATATTTGGGTGGTTGCAATGAAC
CGCTGCATCAAAACCGCAGATACCAACCCGAAAAGCAAAGATTTTTGGATTAAGTATCAA
TTCAAGTACTTACAACCAAATGTGAATAACAGAGATGAGGTAAAAAGAACAATTAAAGCC
CTCCTCAATGCTGATTCGAAATCAAAAGCTGAAAGTAGCTTAGTTGTTGCGCTTCCCGCC
TTAAATAAAATGGTTCAGTTCAACAGAGTAGATTGCTTACGCCACCCAGTGTCAGTGGCC
TATCTTCGTATGAAGTGGAATGCTTATGGCAGATGGGTGCACGGTTTAAATCTTTTCATC
TACATACTTGGACTCTTTCCTTTGACTTATCTCATTTGCACAATGGATTCTAACCCACAT
GATGATTCCAATTTGAACTCAACTTCTACAACGATACATCGCGAACCATTACAGTTTACA
GCATTCCAATATACAATGATGATACTTTTGACGATACTCTCAACATGTCAAATGATAAAG
GAAGTAATACAAATGATACAGCAGAAAAAGAAATATTTCTTGGATTTTACGAATGCTGTG
GAATGGATATTGTATTTAGACAGTCTACTCTTCGTTGTCCCTTTCTTCACTGGCTATTCC
GTTCACTGGCAGTTCGAATGCGGTGCAATAGCAATTTTGCTTGCGTGGTTCAATTTATTG
TTGTTTTTGCGAAGATTTGATTTAGCAGGAATCTATGTGGTGATGTTTCTGGAAATCTTC
AAAACACTGATAAAAGTTATTATCGTGTTTTCCTTCATGCTTGTTGCATTTTCCTTGTCG
TTTTTCGTTCTAATGAGACACGAGAATGACAAGGCTTTCAAAAACCCTGGTCTGGCGTTT
ATGCGCATCTTCACTATGACTCTCGGTGAGATGGGGTATACGGAAGGTTTCCTTGAACCC
TACGTGGATGACGATCCGAATACATTACATTTCCCTGTTACTTCGATGATCTTGCTGATC
GTGTTTATACTTGTGATGCCGATTCTCCTAATGAACTTGCTAATTGGTTTAGCCGTTGGT
GACATCGCAGAAGTTCAAAATAATGCTTCACTTCAAAGACTAGCCATGCAGGTTCAACTT
CATACTGACATTGAAGGAAAGCTTTCTACACGTGTACTCAGACATGTCGACAAAGAGGAA
TTAATTATCTATCCAAATGGATCTCGGAGTCATTATAACAAGTTCTGGAACTTTATTGAA
CAGAGTTCAATAATAGAGAATTGTACTGAGACGGTAACAAAGGCGGATCGAAATATCAAT
TACCTGAATTTGGAAATTCAAAAACAGAAGCATAGAATTAAAGGCATCCAGTCGTCCTTG
TCTAAGCAACACGACCTCTTGCGATTGATCGTGCAGAAAATGGAAATCCGGTCGGAGGCC
GATGACCAAGATGAAGGTTTAGGCTCAGAAATACAAAGACGTCTTCAAAGTAATCGTAGT
CGAATAGCAAGTAATGTCGGAAGCAAAATCATGGCTGTGCGGGCGTTTAAGTCGGTTCTG
CAGTAA
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[149-283] 4.3E-21 - T[284-418] 1.5E-28 - T[422-612] 3.5E-34 - T[613-817] 1.7E-33 |
| PANTHER |
TRPA1/painless (IPR030288) - T[150-1254] 0.0 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[182-392] 3.4E-40 - T[366-741] 7.55E-60 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[184-720] 89.349 |
| SMART |
Ankyrin_rpt (IPR002110) - T[184-213] 230.0 - T[220-249] 7.3E-4 - T[253-282] 190.0 - T[289-318] 0.0023 - T[322-351] 6.4 - T[363-392] 0.0089 - T[396-425] 51.0 - T[434-463] 1.3E-5 - T[467-496] 0.04 - T[553-584] 0.057 - T[586-615] 13.0 - T[622-651] 6.7E-7 - T[654-683] 1.0 - T[688-717] 0.031 - T[720-749] 210.0 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[215-343] 1.21914E-28 - T[361-488] 2.09621E-25 - T[548-675] 9.63875E-31 - T[617-741] 9.88562E-30 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[220-252] 10.793 - T[289-314] 10.018 - T[322-345] 8.87 - T[434-466] 13.33 - T[467-499] 9.404 - T[553-585] 10.018 - T[622-654] 13.971 - T[688-720] 9.164 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[237-317] 9.3E-10 - T[368-463] 4.8E-11 - T[546-610] 4.7E-9 - T[619-676] 3.5E-12 |
| Pfam |
Ion_trans_dom (IPR005821) - T[901-1128] 2.8E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TRPA1_HUMAN | 38.868 % | 731 | 0 |
| ANK2_HUMAN | 27.465 % | 167 | 1.78E-41 |
| ANK1_HUMAN | 28.444 % | 167 | 1.73E-41 |