Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S2300.g09476.01.t

Possible name(s)

ZNF28; ZNF665; ZSCAN22

Gene model

Haaura.CG.MTP2014.S2300.g09476

Location

S2300 [7,375 / 8,622]

Sequences

Amino acid sequence

Length: 123

>Haaura.CG.MTP2014.S2300.g09476.01.p
MWIHTGKKLYKCKICGKTFAHSAHLSRHQVIHTGEKPYKCELCNKAFSRQEYIKSHMKSH
TGEKPYKCDRCEKRFRHATHVSRHMKIHMRKIQHICGVCDQSFVLEDFLKKHLLTHGIVD
PA*

Nucleotide sequence

Length: 762

>Haaura.CG.MTP2014.S2300.g09476.01.t
ATGAAAAGTTCTCTGAAAGAAAACCCGTTCAGGTGTGAAAAATGTCGGAGAACTTTCTCC
AGAAAGCAGAATTATGACCGGCATGTTGGAACTCACGAAGACAATGATAAACTTTTCGGA
TGTTCTGTGTGCGGCAAAGGATTCAAAATGGCTGATGATTTGCAGAAACATGTACAATCT
CAACATTTCGATACAGTGGATGATTATATGGCGGACGAGATCTGTGATGAGAAATTCACC
AATATGAAAGATTATGAAAGACGTCGGAAATCATCTTCAAAATATATAAAGACAACACAT
TGAACTTGCATTGAACTCTATCATCGTAAAAAGACGTACGAATGTGAGGTATGTCACAAA
AAATTTTCCAGGCAAGACCACGTGAAGGAACATATGTGGATCCACACGGGAAAAAAACTA
TACAAATGTAAGATATGCGGGAAGACGTTTGCACACAGCGCTCATCTCAGTCGTCACCAG
GTTATCCACACGGGAGAGAAACCTTATAAATGTGAACTATGCAACAAAGCCTTCTCAAGG
CAAGAATACATAAAAAGTCACATGAAGAGTCACACGGGAGAAAAACCATATAAATGCGAC
AGATGTGAAAAACGGTTTCGTCATGCGACGCACGTGAGCAGACACATGAAAATACACATG
CGGAAAATCCAGCACATATGTGGCGTGTGTGATCAAAGTTTTGTTCTGGAAGACTTTTTG
AAGAAACATTTATTAACCCATGGTATTGTTGACCCTGCTTGA

InterProScan

PIRSF	UCP017292 (IPR016694) - T[1-60] 1.4 - T[55-116] 0.003
SUPERFAMILY	Znf_C2H2_sf (IPR036236) - T[4-56] 8.61E-20 - T[34-89] 1.18E-16 - T[83-116] 3.44E-7
SMART	Znf_C2H2_type (IPR013087) - T[10-32] 7.7E-4 - T[38-60] 4.3E-4 - T[66-88] 0.019 - T[94-116] 0.17
ProSiteProfiles	Znf_C2H2_type (IPR013087) - T[10-37] 17.496 - T[38-65] 16.54 - T[66-93] 11.884 - T[94-121] 9.162
ProSitePatterns	Znf_C2H2_type (IPR013087) - T[12-32] . - T[40-60] . - T[68-88] . - T[96-116] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ZN665_HUMAN	47.899 %	119	1.5E-32
ZSC22_HUMAN	46.218 %	119	8.65E-33
ZNF28_HUMAN	47.059 %	120	1.09E-32