- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S232.g03542.01.t
Possible name(s)
ASH1L; PHF20; PHF20L1
Gene model
Location
S232 [17,592 / 30,773]
Amino acid sequence
Length: 1,555
>Haaura.CG.MTP2014.S232.g03542.01.p
MDDIYKDLELIKKGTETDKESTLVGDEKKSSKEKKKTEESMNKKGKAAKSSNETAVASKT
PVVAKKRAKTMSPGQIRSDLKGKTKSRKSVGVAKNSPSLGKIKMIKKQEPKKNEKKSDKR
VTESKESKSLKKEKDKPADSIPATPAVRVKGSIDPNATPIVGIRFDEGAKIEAVDSGHWY
KARIVKVDQENMDILVHFDGWGARFDTWFPMTSTLIRGRTQLDSKPDMPVYDAGEDVLAK
WTDGNFYPATVLNVKESGSCLVMYFDGMKKLLRPNVMKKMSESEKETAMKSVEKLFMVPP
AESSSEGDKPAVKVSYRRYRTSADDRGRRASRNERPSEEALSTDKAPEKKAVKRKASQIS
VADEKTKADESPDKPENKTSGDDIFHAKKARLDKITHNLLDRVSPTLDSVLHCINKTFFV
YKAVEKDMNEDSDSPLVIDEDSQSKQMKKRKLKESKTRENVEGARGPRGGHVLKISKTNN
TSLAKKLQDDEKAQGLAEESGEENLHQLADAALSSPAVSASEEAKISEETTTPEIQTNTE
PIKAASEALLQLSQGFTSTDNIPSVTQATSQSCVTDTKQLLQSVSSSTGSAEKSTEEVKK
EAVQNDKIEGTDLQGNTTGKKDTTEDTTENSNLSKARPVYKKGDTVLAKWADCRSYLAYI
LRRESGDSYKIRYYDGMVKIVKSSLIHPWVGPLPASLKTFNPTVKQSPSMKQRSRSSDTK
ISQEKQKAEVRGRTASLPVKEDASKVTAKESQPSSQGSLDHIHYRAEEKVLAKWIDSKWY
PATVIHQTNADHYRIKYSGGITKIVNDTWLTPWKPPSQSKSGKKIEGTEINQISWVTDSL
AGEGDEESHADVEGESNKSKEDSVAPKSDQRNEGDEFYVGQSVLARWTDCRSYPATVKEV
QADGKCTVVYYDGMDRTLKPSMLKPWNPASFPSKPGGTRDEDISKNRLRTRVSSQDNKAT
QHKEPSLPRQVVRGYDAYYARLPPASKEFVVETDHNKFKCRVPGCTKSFRKEQLLRQHHK
YYHQQRYKLRDQESPTPVAKRRSSKEDSTPKRRVSADYEAISKGLDATAFPVVRMTDIGN
GGNVPPSVRSRGAKPPMDIYKKQQGDITLSSTSSLLDSSSGVDDGNQNDKTKSPKESVHI
FNQDTQITSLEARSKRKRKRQLSAQYSPRSDALKTDDFVDSKTTSPISPLPDEAETVNED
VIRCVCGVEEEEGFMIQCEGCFTWQHAACVGFDSPNTSAQKDKNKSIEENVSSKTENSKL
DTLPGDENIADAVSKAVDSYVCWVCKNPQNVRRSCQYLYNSDFLAKGKLPSLANPNGSAE
DIATVNSKKSFEFMMMALHQVIDEVVKMQEALQGIKQKIKIVSDPADHPLLKTWEDSSNS
TSISAEGADVEEVISVENGDQATDNANQHSDNLALPNVTDMEGVSKEDGTGSVPTVADPK
ITDVEGSPGRIEEHLISGNGNSRTPKKMKKVAEKAGSRKKGTEEDFEIDVELCRENLLSH
IIGLEKTLDQRLTQLEDYVSNIDWPENEDPEIDNADIEKLQDDLTAVQKLLSYC*
Nucleotide sequence
Length: 4,665
>Haaura.CG.MTP2014.S232.g03542.01.t
ATGGATGATATATACAAGGATCTTGAGCTCATAAAAAAAGGAACAGAAACAGATAAAGAA
TCTACTCTTGTTGGTGACGAGAAAAAAAGTAGTAAAGAGAAGAAAAAGACAGAGGAGTCA
ATGAATAAGAAAGGTAAAGCTGCAAAATCTAGCAATGAAACGGCTGTTGCTTCTAAAACA
CCAGTTGTTGCCAAAAAAAGAGCCAAAACTATGTCACCGGGACAAATACGATCAGATTTG
AAAGGAAAAACTAAATCTCGCAAAAGTGTTGGTGTAGCTAAGAATTCTCCTTCTTTGGGT
AAGATCAAGATGATAAAGAAGCAAGAACCTAAAAAAAATGAGAAGAAATCTGACAAAAGA
GTTACGGAATCGAAAGAGAGCAAATCGCTGAAAAAAGAAAAAGATAAGCCCGCGGACAGC
ATACCTGCAACGCCTGCTGTAAGGGTTAAAGGTTCGATTGATCCAAACGCTACTCCGATT
GTGGGAATAAGGTTTGATGAGGGAGCTAAAATCGAGGCTGTTGACAGTGGCCATTGGTAC
AAAGCAAGAATTGTCAAAGTTGATCAGGAAAATATGGATATCTTAGTACATTTTGATGGA
TGGGGTGCCCGTTTCGATACATGGTTTCCAATGACAAGCACGCTGATTAGGGGACGAACA
CAACTTGATTCCAAGCCTGATATGCCAGTATATGACGCTGGTGAGGATGTTCTTGCAAAA
TGGACAGATGGGAATTTCTATCCAGCTACAGTCTTGAATGTTAAGGAATCTGGCTCTTGC
CTTGTTATGTACTTTGATGGGATGAAGAAATTATTGAGACCTAATGTGATGAAGAAAATG
TCAGAGAGCGAAAAGGAAACGGCCATGAAGTCCGTTGAGAAACTTTTCATGGTGCCACCT
GCTGAAAGTTCAAGCGAGGGTGATAAACCAGCTGTAAAGGTTTCTTATCGCAGATATAGA
ACTTCAGCTGATGATAGAGGGAGAAGGGCTTCCAGAAATGAAAGGCCTTCAGAAGAAGCT
CTCAGTACTGACAAAGCTCCAGAGAAAAAAGCAGTTAAGAGGAAGGCATCTCAAATCAGT
GTCGCAGATGAGAAAACTAAGGCTGATGAATCTCCAGACAAACCTGAAAATAAAACCTCA
GGTGATGATATATTTCATGCAAAGAAAGCCCGTCTAGACAAAATAACACATAACCTTCTG
GATCGCGTCTCACCTACATTAGACAGTGTCTTGCATTGTATCAATAAGACTTTTTTTGTT
TATAAAGCTGTGGAAAAGGATATGAATGAGGATTCTGACAGCCCTCTTGTGATTGATGAA
GATTCTCAAAGCAAACAAATGAAAAAACGAAAACTGAAAGAGTCCAAAACTAGGGAAAAT
GTAGAGGGCGCAAGAGGTCCTCGTGGTGGGCATGTCTTGAAAATCAGCAAGACTAACAAT
ACCTCACTTGCTAAAAAATTACAAGATGATGAAAAAGCCCAAGGGTTAGCAGAAGAAAGT
GGAGAGGAGAATTTACACCAGTTAGCTGATGCTGCACTGTCATCACCTGCTGTCTCAGCA
TCTGAGGAGGCAAAAATATCTGAAGAAACAACCACACCGGAAATTCAAACAAATACAGAA
CCTATTAAAGCAGCTAGTGAAGCTTTATTGCAGCTTTCGCAAGGCTTCACTTCAACAGAT
AATATTCCAAGTGTTACTCAAGCTACCAGTCAGAGCTGTGTAACAGACACTAAACAATTG
TTGCAATCAGTAAGTTCAAGCACTGGTTCAGCAGAAAAATCAACTGAAGAAGTTAAGAAG
GAAGCTGTCCAAAATGATAAAATCGAAGGCACAGACTTGCAAGGAAACACAACTGGTAAG
AAAGATACCACTGAAGATACCACTGAAAATAGCAATTTGAGCAAAGCTCGTCCAGTCTAT
AAGAAAGGAGATACTGTTTTGGCTAAGTGGGCAGACTGTAGATCATACCTGGCTTACATT
TTGCGAAGAGAATCAGGAGATAGCTACAAAATTCGGTACTATGATGGCATGGTCAAAATA
GTCAAGTCATCCTTGATTCATCCATGGGTTGGTCCACTACCGGCTTCCTTAAAAACCTTC
AATCCCACTGTCAAGCAAAGCCCTTCCATGAAACAAAGAAGTAGGTCCAGTGACACAAAA
ATCAGTCAAGAAAAGCAAAAGGCTGAAGTAAGAGGTAGAACAGCATCCTTACCAGTGAAA
GAAGATGCATCCAAAGTAACAGCAAAGGAAAGTCAACCTTCATCGCAAGGTTCCCTTGAT
CACATTCATTATCGAGCTGAGGAAAAAGTTCTAGCCAAGTGGATAGATTCCAAGTGGTAT
CCTGCAACGGTTATTCACCAAACGAATGCTGATCATTATAGAATAAAGTATAGTGGTGGT
ATAACAAAGATTGTGAATGACACCTGGCTGACTCCTTGGAAACCACCAAGTCAAAGTAAA
AGTGGCAAGAAAATAGAAGGCACCGAGATTAACCAAATATCTTGGGTCACCGATTCTTTA
GCTGGCGAAGGTGACGAAGAAAGCCATGCTGATGTGGAAGGAGAATCTAACAAATCTAAG
GAGGATTCTGTTGCGCCCAAATCAGATCAAAGGAATGAAGGCGATGAGTTTTATGTTGGA
CAGTCTGTGCTGGCACGGTGGACTGACTGTCGCAGTTATCCCGCAACGGTTAAAGAAGTT
CAAGCTGATGGAAAATGTACTGTTGTATACTACGATGGAATGGACCGGACTCTAAAACCT
TCCATGCTAAAACCTTGGAACCCGGCCTCTTTCCCATCTAAACCTGGCGGTACAAGGGAT
GAAGATATATCCAAAAACAGGCTTCGAACAAGAGTTTCTTCACAGGATAACAAAGCAACA
CAACACAAAGAACCCAGTTTGCCTAGACAAGTGGTTCGGGGCTATGACGCTTATTATGCG
AGGCTGCCCCCAGCTTCGAAAGAGTTTGTGGTTGAAACAGATCATAACAAATTCAAATGC
CGAGTTCCAGGTTGCACGAAGTCCTTCAGAAAAGAACAGCTTCTGAGACAGCACCATAAA
TACTATCATCAACAGAGATACAAACTGCGCGATCAGGAATCACCCACTCCTGTAGCGAAA
CGTAGAAGTTCAAAGGAAGATTCAACACCTAAGCGACGTGTCTCTGCCGATTATGAAGCC
ATATCTAAAGGACTCGATGCGACCGCTTTTCCAGTTGTCAGAATGACTGATATCGGAAAT
GGGGGTAATGTACCACCGTCTGTACGTAGTAGAGGTGCCAAACCTCCAATGGACATCTAC
AAAAAGCAGCAGGGAGATATCACCTTGTCTTCAACATCTTCATTGCTGGATAGCAGTAGT
GGGGTTGACGATGGGAATCAAAATGACAAAACAAAATCTCCGAAGGAATCGGTGCATATT
TTTAATCAGGACACACAAATAACCTCCCTGGAAGCAAGATCCAAGCGAAAAAGGAAAAGA
CAACTCAGTGCTCAATACAGCCCGAGAAGTGATGCTTTAAAAACAGATGATTTTGTGGAT
TCTAAGACAACTTCACCCATTTCCCCTCTTCCTGATGAGGCAGAAACTGTGAATGAGGAT
GTGATTCGTTGTGTTTGTGGTGTGGAAGAAGAGGAGGGCTTCATGATACAGTGTGAAGGA
TGCTTCACTTGGCAGCATGCTGCTTGTGTTGGCTTCGACTCTCCCAACACCTCTGCACAA
AAAGATAAAAATAAATCCATAGAAGAAAATGTGTCTTCCAAAACTGAGAATAGTAAACTG
GACACTCTGCCAGGAGACGAAAATATTGCAGATGCTGTAAGCAAAGCGGTTGACAGTTAT
GTTTGCTGGGTTTGTAAAAATCCTCAGAATGTTAGAAGATCTTGTCAGTACCTGTATAAC
AGTGATTTCTTGGCCAAAGGCAAGTTGCCATCTCTTGCCAATCCAAATGGATCTGCTGAG
GATATTGCTACAGTCAATTCAAAGAAGTCATTTGAATTTATGATGATGGCTCTTCATCAA
GTCATAGATGAAGTTGTCAAGATGCAAGAAGCCCTTCAAGGAATTAAGCAGAAAATAAAG
ATTGTTTCGGATCCCGCAGACCATCCCCTCTTGAAAACTTGGGAAGATAGCAGTAATTCC
ACAAGCATATCTGCAGAGGGAGCAGATGTAGAGGAAGTTATCAGTGTGGAAAATGGCGAT
CAAGCTACAGATAATGCCAACCAGCATTCAGATAACCTTGCCTTACCAAATGTTACAGAT
ATGGAAGGTGTGTCCAAAGAGGACGGTACTGGTTCTGTACCAACAGTCGCCGATCCAAAA
ATTACAGATGTAGAAGGAAGCCCAGGTAGAATTGAAGAACATCTGATTTCCGGTAATGGA
AATTCTAGAACACCTAAGAAGATGAAAAAGGTAGCAGAGAAGGCTGGTAGCAGAAAAAAG
GGAACAGAAGAAGATTTTGAAATAGATGTTGAACTCTGTCGTGAAAACTTGCTCAGTCAC
ATAATTGGTCTGGAAAAAACATTAGACCAGAGACTCACACAATTGGAAGATTATGTGTCA
AACATCGACTGGCCTGAAAATGAAGATCCGGAGATTGATAATGCAGATATAGAAAAGCTC
CAGGATGATTTGACTGCTGTTCAAAAACTCCTTTCGTATTGCTAG
| PANTHER |
PHF20 (IPR037915) - T[12-137] 2.8E-86 - T[161-544] 2.8E-86 - T[638-734] 2.8E-86 - T[762-862] 2.8E-86 - T[874-964] 2.8E-86 - T[983-1232] 2.8E-86 - T[1278-1402] 2.8E-86 |
| SMART |
Mbt (IPR004092) - T[132-229] 0.0014 |
| SUPERFAMILY |
Chromo-like_dom_sf (IPR016197) - T[163-217] 7.69E-12 |
| SMART |
Tudor (IPR002999) - T[163-222] 0.34 - T[229-285] 2.9E-10 - T[638-694] 1.6 - T[762-819] 5.2 - T[875-931] 2.9E-7 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[998-1028] 10.45 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[1000-1023] . |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[1192-1248] 1.5E-13 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[1195-1238] 3.77E-11 |
| SMART |
Znf_PHD (IPR001965) - T[1203-1286] 9.1E-8 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[1203-1241] 9.0E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| P20L1_HUMAN | 36.364 % | 96.3 | 7.14E-20 |
| PHF20_HUMAN | 30.208 % | 95.1 | 1.81E-19 |