- Transcript 'KH2012:KH.L41.49.v2....' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2550.g09700.01.t
Possible name(s)
ZNF112; ZNF235; ZNF570
Gene model
Location
S2550 [11,573 / 12,407]
Amino acid sequence
Length: 278
>Haaura.CG.MTP2014.S2550.g09700.01.p
MVIHCEVCDLPCQGKAHLKIHMRKHTEEKPFKCDVCEKCFSQQGNLKTHMRIHTQEKPYR
CEVCDKRFSQRGNLKNHMLINTNEKPFQCEICKKSFRRSVALKVHIQTVHMKEKPHWCEV
CDKSFGHKSSLTEHIRWHINYEKFECEICDKRFSERKHLKDHMTIHTKDYLFQCGMCPEK
FALSGHCNHHKERMHSVMNCKCSVCGNTFTSKYDLKIHKEEEHKGSDDKYHCEVCDLICR
DLTNLTDHMRKHTEEKPFKCDVCEKCFSHQGNMKTHMR
Nucleotide sequence
Length: 834
>Haaura.CG.MTP2014.S2550.g09700.01.t
ATGGTGATACATTGTGAGGTTTGCGATTTACCGTGTCAAGGTAAAGCTCATCTCAAGATC
CACATGAGAAAACACACAGAGGAAAAGCCATTCAAATGTGATGTATGCGAGAAATGTTTT
TCCCAGCAGGGAAATCTGAAAACACACATGAGAATTCACACGCAGGAGAAACCGTATCGC
TGTGAAGTTTGCGATAAGCGGTTCTCACAAAGGGGAAATCTGAAAAACCATATGCTAATC
AACACCAATGAAAAACCTTTTCAATGTGAAATATGTAAGAAATCCTTCCGGAGATCTGTA
GCATTGAAAGTGCACATACAAACCGTTCATATGAAAGAGAAACCGCATTGGTGTGAAGTC
TGTGATAAATCGTTTGGTCATAAATCGAGCTTGACTGAGCACATTAGGTGGCATATTAAT
TATGAAAAGTTCGAATGTGAGATCTGTGATAAACGTTTTTCAGAGAGAAAACATTTGAAA
GATCACATGACAATTCATACGAAGGATTATTTATTTCAATGTGGCATGTGCCCTGAGAAA
TTTGCACTAAGCGGACATTGCAACCATCACAAGGAAAGAATGCACAGTGTAATGAACTGC
AAGTGTTCGGTGTGTGGAAATACATTCACATCGAAATATGATTTGAAGATACATAAGGAA
GAAGAACATAAAGGATCTGATGACAAATATCATTGTGAAGTTTGTGATTTAATTTGTAGA
GATCTCACTAATTTGACTGATCATATGAGAAAACACACAGAGGAAAAGCCTTTCAAATGT
GATGTATGTGAGAAATGTTTTTCCCACCAGGGAAATATGAAAACACACATGAGG
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[3-30] 10.616 - T[31-58] 16.145 - T[59-86] 14.025 - T[87-115] 13.858 - T[116-143] 11.053 - T[144-171] 12.445 - T[200-228] 10.512 - T[230-257] 11.697 - T[258-278] 10.533 |
| SMART |
Znf_C2H2_type (IPR013087) - T[3-25] 0.18 - T[31-53] 9.0E-5 - T[59-79] 0.62 - T[87-110] 2.5E-4 - T[116-138] 5.6 - T[144-166] 2.8E-4 - T[172-195] 8.7 - T[200-223] 0.045 - T[230-252] 0.0033 - T[258-278] 6.5 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[5-25] . - T[33-53] . - T[89-110] . - T[146-166] . - T[174-195] . - T[200-223] . - T[232-252] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[15-68] 3.21E-21 - T[68-125] 1.12E-19 - T[110-162] 1.28E-14 - T[166-218] 1.83E-7 - T[229-278] 7.98E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN112_HUMAN | 38.321 % | 198 | 7.23E-58 |
| ZN235_HUMAN | 39.924 % | 195 | 1.71E-57 |
| ZN570_HUMAN | 38.628 % | 192 | 1.35E-57 |