- Transcript 'KH2012:KH.C6.158.v1....' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S2558.g09706.01.t
Possible name(s)
IARS; IARS2; VARS
Gene model
Location
S2558 [2,256 / 6,075]
Amino acid sequence
Length: 1,273
>Haaura.CG.MTP2014.S2558.g09706.01.p
MVEAVPERINFPEEEEKTLKFWEENDTFRVSLKMSKDMPKYAFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGYYVERRFGWDCHGLPVEYEIDKTFGFKGPEDVLKYGIGEYNKQC
RAIVMRYADDWEYIVKRMGRWIDFKNDYKTLYSTFMESVWWVFKQLFDKGFVYKGFKVMP
YSTGCNTPLSNFEAGQNYKDVIDPAVIVSFPLLEDPNVKLIAWTTTPWTLPSNLAVCVHP
TMIYVKVRDVTTNEVYILMEARLIALYKKEEEYEILERFEGKTLDGKKYLPLFNYFSYLE
EAFRVTCDAYVTDDSGTGMVHQAPFFGADDYRVSIANGIIKKDGVPICPVDASGKFTEEV
KDFAGIYVKDADKLICWHLKQNGRLVHQSTTKHNYPFCWRSETPLLYKAVPSWFIRVEHM
TDKLLKNNEKSYWVPEFVKEKRFANWLRDAHDWAVSRNRYWGTPIPLWVSDDMEEVICVG
SIDELYRLSGVKVTDLHREYIDDITIPSQNGKGLLRRVSEVFDCWFESGSMPYAQKHYPF
ENKKEFEDTFPANFIAEGIDQTRGWFYTLLVLSTALFDRPPFQNLIVNGLVLASDGHKMS
KKKKNYPDPLNVVHAYGADALRLYLINSPVVRAENLRFQESGVRDILKDVFLPWFNAYRF
FIQNVIRYNKEEKGEFQYDQSALGNSDNIMDRWILSYVQSLTLFVKKEMAAYHLYTVVPK
LVKFIDVLTNWYVRSNRKRFKGEGGEEDCQKALQTLCSVLFTMIRLMSPFTPFLSEYMYQ
NLRHVLSEKDSGMSSIHFMMLPEANEKLIDKAIEKAVTRMQAVIELGRVIRDRKTLPIKY
PLREIVVIHNDPEYLEDVKSLVHYVKEELNVRELTTSTDKEKYGVILCARPDHFLLGKRL
KAAFKAVTTGIHKLTSEQIEGYQQTGKIEVCGHELGEGDLRIHYQFTSDSVDGQSKSKYE
AHSDNDVLVLLDVTPDQSLLDEGVAREIVNRIQKLRKKAQLVPTDEVSVYFDDSKSSSYL
SDLAKSHAEYITSTIKSPFFIGPVPVSAEVIIEDSNDLKGSSFGLALAKGHLHAGDTDQS
KPVCKYVNVSLSYDDIYSGDATVVLENPKGCPVISGLRQFKSAICKLYSPDKATSVISNG
ENGSFEPANGEVITVNIRKKDQASGVSLDGIFSSDYSRVTVYHNFEGIIKNPTSAFVNVK
FLGKSTQAVVGTVFLENPAGGNRIRYEEFVDECASLFNSRNRTVLLFEDSKCTKPVTNLD
GLNNATIFATAK*
Nucleotide sequence
Length: 3,819
>Haaura.CG.MTP2014.S2558.g09706.01.t
ATGGTTGAAGCCGTGCCAGAGCGTATTAACTTTCCAGAAGAAGAAGAAAAAACTCTTAAA
TTTTGGGAAGAAAATGATACCTTTCGGGTCTCCTTAAAGATGTCCAAGGACATGCCAAAA
TACGCCTTCTATGACGGACCGCCGTTCGCAACGGGACTACCTCACTACGGCCACATCTTG
GCCGGGACGATCAAAGACATCGTCACACGGTACGCCCACCAGAGTGGCTACTACGTGGAG
CGTAGATTTGGCTGGGACTGTCATGGATTGCCGGTGGAATACGAAATAGACAAAACGTTC
GGTTTTAAAGGTCCGGAAGATGTGCTGAAGTATGGTATCGGGGAATACAATAAGCAGTGC
AGAGCTATAGTGATGAGATATGCCGACGACTGGGAGTACATTGTCAAACGAATGGGTCGT
TGGATTGACTTCAAAAACGATTACAAAACACTGTACAGTACATTCATGGAAAGCGTGTGG
TGGGTTTTCAAGCAACTCTTCGACAAAGGATTCGTCTACAAAGGATTCAAGGTGATGCCG
TATTCAACTGGATGCAACACCCCCTTGTCTAATTTCGAAGCTGGTCAAAATTACAAAGAC
GTCATTGACCCGGCGGTGATTGTGAGTTTCCCGCTGCTGGAAGACCCTAACGTCAAACTG
ATCGCCTGGACCACGACGCCCTGGACGTTGCCGAGCAACCTGGCAGTTTGCGTCCACCCT
ACTATGATCTACGTCAAAGTGAGGGATGTCACTACAAACGAGGTTTACATTCTGATGGAA
GCTCGGCTCATCGCTCTTTACAAGAAAGAAGAAGAGTATGAAATTCTAGAGAGATTTGAA
GGCAAAACATTGGACGGAAAAAAATATCTTCCACTGTTCAATTATTTCTCTTATCTCGAG
GAAGCCTTCCGTGTGACGTGCGACGCATACGTCACTGACGACAGCGGCACTGGCATGGTC
CACCAGGCTCCTTTCTTCGGTGCAGACGATTACCGAGTGAGCATCGCTAACGGCATCATC
AAAAAGGATGGAGTCCCCATCTGCCCGGTGGACGCAAGTGGTAAGTTCACGGAGGAGGTC
AAAGATTTTGCTGGAATTTATGTCAAGGATGCCGACAAGTTGATATGTTGGCATCTGAAA
CAAAACGGACGATTGGTTCATCAAAGCACGACCAAGCATAACTATCCATTCTGCTGGCGC
TCGGAAACCCCGTTGCTGTACAAAGCCGTGCCTAGTTGGTTCATTAGGGTGGAGCACATG
ACGGATAAACTGCTGAAGAACAATGAAAAATCATACTGGGTGCCGGAATTTGTGAAAGAA
AAGCGATTTGCAAACTGGCTGAGGGACGCGCACGACTGGGCCGTGAGCAGGAACAGGTAC
TGGGGTACACCGATACCCTTGTGGGTAAGCGACGATATGGAAGAAGTGATCTGTGTCGGA
TCCATAGATGAATTGTATCGATTGTCCGGCGTGAAAGTCACGGATTTACATAGGGAATAC
ATCGATGACATCACTATTCCTTCGCAAAATGGGAAAGGCCTTCTTCGTCGCGTGTCCGAA
GTATTCGATTGCTGGTTCGAAAGTGGATCCATGCCGTATGCCCAGAAGCATTATCCGTTC
GAGAACAAAAAGGAATTCGAAGACACCTTTCCCGCCAATTTCATCGCCGAAGGAATAGAC
CAGACACGTGGCTGGTTTTATACTCTGCTCGTGCTTTCGACGGCTTTGTTCGATCGGCCT
CCTTTCCAAAACCTGATAGTAAACGGTCTGGTACTTGCTAGTGACGGACATAAAATGAGC
AAGAAGAAGAAAAATTATCCGGATCCATTGAACGTAGTCCACGCTTACGGAGCCGACGCG
CTCCGATTGTATTTGATCAATTCTCCAGTGGTTCGTGCGGAAAACCTCCGTTTTCAGGAA
AGCGGAGTCCGAGACATCTTGAAGGACGTGTTCTTGCCGTGGTTCAACGCTTATCGCTTC
TTCATTCAGAACGTCATCAGGTACAACAAGGAAGAGAAGGGGGAATTCCAGTACGATCAG
AGTGCTTTAGGAAATTCTGACAATATTATGGATAGATGGATATTGTCATATGTTCAGTCC
CTCACTCTGTTTGTGAAGAAGGAAATGGCTGCATATCATCTTTACACTGTCGTACCTAAA
CTGGTAAAGTTCATAGACGTGCTCACCAACTGGTACGTGCGTTCCAACAGGAAGAGATTC
AAGGGAGAAGGAGGCGAAGAGGATTGTCAAAAAGCACTCCAAACACTATGCAGTGTTCTC
TTCACCATGATACGCCTAATGAGTCCGTTCACCCCGTTTCTCTCCGAGTACATGTACCAG
AACCTGAGGCATGTGCTGAGCGAAAAGGATAGCGGTATGTCCAGCATCCACTTCATGATG
CTCCCAGAAGCCAACGAGAAGCTCATCGACAAGGCTATTGAAAAGGCCGTCACACGCATG
CAAGCTGTGATCGAACTCGGACGGGTCATACGTGATCGTAAAACGTTACCCATCAAGTAT
CCCTTGAGAGAGATTGTTGTCATACACAATGATCCGGAATATCTAGAAGATGTAAAAAGC
CTGGTTCATTACGTCAAGGAGGAACTCAACGTGCGTGAGCTGACCACTTCGACCGATAAG
GAAAAGTATGGAGTGATTCTGTGTGCTCGTCCTGACCACTTCCTACTGGGAAAACGTCTG
AAAGCAGCATTCAAAGCCGTCACTACCGGAATCCACAAGCTTACGAGCGAACAGATTGAA
GGATACCAGCAGACGGGTAAAATAGAAGTATGCGGGCACGAACTCGGGGAGGGAGACTTA
CGAATCCATTATCAGTTCACCTCCGACTCAGTCGACGGGCAGTCGAAATCAAAATACGAA
GCTCATTCTGACAATGATGTTCTCGTTCTATTGGACGTTACTCCGGATCAAAGCTTGCTG
GACGAAGGCGTTGCCCGAGAAATTGTGAATCGCATACAGAAACTGAGGAAGAAAGCCCAG
CTGGTACCGACCGACGAAGTTTCGGTATATTTTGACGACTCCAAATCTTCCTCTTATTTG
TCTGATCTGGCCAAATCTCATGCGGAATACATCACATCCACTATCAAGTCGCCGTTCTTC
ATTGGTCCTGTTCCTGTTTCGGCTGAAGTGATTATCGAAGACAGTAATGATCTGAAAGGC
AGTTCCTTTGGTCTCGCTTTAGCTAAAGGACATCTACATGCAGGAGACACGGATCAATCG
AAGCCTGTTTGCAAATACGTCAATGTTTCTTTATCATATGATGACATATACAGCGGAGAT
GCTACTGTCGTCCTGGAAAATCCGAAAGGTTGCCCTGTCATATCTGGTCTCAGGCAATTC
AAATCGGCCATATGCAAATTATATTCGCCCGACAAAGCAACCTCGGTAATTTCCAACGGA
GAAAACGGAAGTTTTGAGCCAGCGAACGGTGAAGTCATCACTGTCAATATCAGGAAGAAA
GATCAGGCATCCGGTGTTTCGCTCGACGGAATCTTTTCTTCGGACTATTCGAGAGTTACG
GTCTACCACAATTTTGAAGGGATCATTAAAAATCCCACGAGCGCTTTCGTGAACGTCAAG
TTCCTCGGTAAGAGTACGCAAGCCGTCGTCGGCACAGTATTCCTCGAAAATCCAGCTGGG
GGGAACCGTATCCGTTACGAAGAGTTCGTCGATGAATGCGCGTCACTGTTCAACTCGAGG
AATCGCACCGTCCTACTTTTTGAGGATTCCAAATGCACGAAACCGGTGACCAATCTGGAC
GGATTGAACAATGCAACCATTTTCGCCACAGCAAAGTAG
| Hamap |
Ile-tRNA-ligase_type2 (IPR023586) - T[3-1059] 12.844 |
| TIGRFAM |
Ile-tRNA-ligase (IPR002301) - T[5-857] 2.2E-282 |
| Gene3D |
Rossmann-like_a/b/a_fold (IPR014729) - T[15-196] 1.4E-232 - T[400-624] 1.4E-232 |
| Pfam |
aa-tRNA-synth_Ia (IPR002300) - T[18-636] 4.4E-230 |
| PRINTS |
Ile-tRNA-ligase (IPR002301) - T[41-52] 2.6E-30 - T[221-244] 2.6E-30 - T[393-408] 2.6E-30 - T[517-530] 2.6E-30 - T[557-566] 2.6E-30 |
| ProSitePatterns |
aa-tRNA-synth_I_CS (IPR001412) - T[48-59] . |
| Gene3D |
Val/Leu/Ile-tRNA-synth_edit (IPR009008) - T[197-399] 1.4E-232 |
| SUPERFAMILY |
Val/Leu/Ile-tRNA-synth_edit (IPR009008) - T[200-395] 2.75E-45 |
| CDD |
Anticodon_Ile_ABEc (IPR033709) - T[638-828] 3.47733E-88 |
| SUPERFAMILY |
tRNAsynth_Ia_anticodon-bd (IPR009080) - T[654-905] 5.42E-47 |
| Pfam |
M/V/L/I-tRNA-synth_anticd-bd (IPR013155) - T[691-843] 9.5E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYIM_HUMAN | 26.835 % | 256 | 1.28E-70 |
| SYIC_HUMAN | 60.203 % | 1590 | 0 |
| SYVC_HUMAN | 22.336 % | 156 | 2.49E-38 |