- Transcript 'KH2012:KH.C8.359.v1....' >
- Transcript 'KH2012:KH.C1.1005.v2...' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S25.g00718.01.t
Possible name(s)
DDX27; DDX47; DDX56
Gene model
Location
S25 [34,832 / 36,641]
Amino acid sequence
Length: 580
>Haaura.CG.MTP2014.S25.g00718.01.p
QLLKENMNQMKRTHDIGNDSEEHEKSNILVGSMENETAQKVNSSQEGEDKVTLFHEMGLN
NCLLKAIAQLNWKKPTLIQEKAIPLAIEGKDILSRARTGSGKTGAYAIPVIQALLEKKEK
QACVRALVLVPSRELSSQVHNMFGQLMSCSPPYVTCSDLSRTDAQLTVLNAKPDIVIGTP
SRILTHVKSGNLDISSSLEWLIIDEADLVLSFGYEDDLKKLVSYFPNTYQSFVTSATFTD
DINALKNLVLKNPVTLQLKESALPSNDRLTQYHVICETEEDKFLLLCALLKLRLVQGKCL
IFVNSITRCYRVKLFLEQFSLFCCVLNSELPVNCRCHTVEQFNKGLYDYIIATDETHILN
AEEAPVSSSKTKKKKRSVKTKEFGVSRGVDFQKVSNVINFDFPESVAAYIHRVGRTARGD
SAGTALSFVTGKEIQLLKDAQSELGDDNCLRPYQFAMKEIEGLRYRCNDAIRIVTKQAIK
DARLRELRAEMLNSTKLQSYFEENPKDLQVLRHNDPLNPSKVKQHMKHIPEYLIPDALKG
IVQQKTRRARGKHSESKLNPKYKRQREDPLKSIKYVKRK*
Nucleotide sequence
Length: 1,740
>Haaura.CG.MTP2014.S25.g00718.01.t
CAACTATTAAAAGAAAATATGAATCAAATGAAGAGGACACATGATATCGGAAACGATTCA
GAAGAACATGAAAAAAGTAATATTTTAGTTGGTAGCATGGAGAATGAAACAGCACAAAAG
GTGAACTCATCGCAAGAAGGTGAGGATAAAGTGACCCTGTTTCATGAAATGGGATTAAAT
AATTGTCTTCTCAAAGCTATAGCACAGTTAAACTGGAAAAAACCAACACTTATCCAAGAA
AAGGCGATACCACTTGCTATTGAGGGTAAGGATATACTGTCCAGGGCACGTACAGGGTCT
GGTAAAACTGGGGCATATGCTATACCCGTCATCCAAGCTCTTTTGGAAAAGAAGGAAAAG
CAGGCATGTGTTAGAGCCCTCGTATTAGTTCCTTCGAGAGAACTGTCATCCCAAGTACAC
AATATGTTTGGGCAGTTAATGAGCTGTTCTCCCCCATATGTGACATGTAGCGACTTGTCC
AGAACTGATGCTCAGTTAACAGTTCTAAATGCAAAACCAGATATTGTAATTGGAACTCCT
AGTCGAATACTTACGCATGTTAAGTCTGGTAATTTGGATATTTCGTCCAGCTTAGAATGG
TTGATAATCGACGAGGCAGATCTTGTATTGTCGTTCGGGTACGAGGACGATCTTAAAAAG
TTGGTTTCGTATTTTCCGAATACTTACCAGTCATTTGTGACTTCTGCCACTTTCACAGAT
GACATAAACGCCCTAAAAAATCTTGTGCTCAAAAACCCTGTGACCCTTCAACTGAAGGAA
TCTGCGTTGCCTTCGAATGACAGGTTGACACAATACCATGTCATATGTGAAACAGAAGAA
GATAAATTTTTGCTTCTCTGTGCTCTGTTGAAGCTCCGACTTGTGCAAGGAAAATGCCTA
ATATTTGTCAACTCCATTACTCGATGCTACAGAGTTAAACTCTTCTTGGAACAGTTTTCG
CTCTTCTGTTGCGTTCTAAACTCGGAATTGCCGGTTAATTGTAGATGCCACACGGTCGAA
CAGTTTAACAAAGGTCTGTACGATTACATTATCGCGACGGATGAAACTCACATACTCAAT
GCCGAAGAAGCACCCGTTTCCTCATCTAAAACTAAAAAGAAAAAACGATCGGTGAAAACT
AAAGAGTTTGGTGTATCTAGGGGAGTTGATTTTCAAAAAGTCTCTAATGTCATTAACTTT
GATTTCCCCGAAAGTGTAGCTGCGTACATTCATAGAGTTGGGCGTACGGCGCGTGGAGAT
AGTGCTGGGACTGCTCTGTCATTTGTCACCGGCAAGGAAATACAACTCCTTAAAGATGCC
CAAAGTGAGCTGGGAGACGATAATTGTCTTCGCCCTTATCAATTCGCCATGAAGGAAATC
GAAGGCTTACGATACAGGTGCAATGACGCAATTCGTATAGTAACTAAACAGGCTATCAAA
GATGCAAGGTTACGAGAACTCAGGGCGGAGATGTTAAATTCAACGAAATTACAATCCTAC
TTCGAGGAAAACCCGAAAGATTTACAAGTACTCCGTCACAATGATCCGCTAAATCCTTCC
AAAGTGAAACAGCACATGAAACACATTCCGGAATATCTGATACCAGATGCTCTTAAAGGA
ATTGTACAGCAAAAGACACGTCGAGCTCGAGGAAAACATTCTGAAAGCAAACTGAATCCC
AAGTACAAAAGGCAACGTGAGGATCCATTGAAAAGCATCAAATATGTGAAAAGAAAATGA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[50-257] 2.66E-49 - T[269-354] 8.1E-30 - T[384-447] 8.1E-30 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[52-80] 9.857 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[71-272] 1.1E-38 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[76-244] 4.3E-40 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[83-256] 24.272 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[268-461] 12.65 |
| Pfam |
Helicase_C (IPR001650) - T[281-419] 9.9E-33 |
| CDD |
Helicase_C (IPR001650) - T[296-428] 2.26862E-18 |
| SMART |
Helicase_C (IPR001650) - T[310-420] 1.6E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 32.658 % | 199 | 3.91E-55 |
| DDX47_HUMAN | 31.514 % | 202 | 9.46E-59 |
| DDX56_HUMAN | 51.009 % | 535 | 0 |