- Clone 'AHC0AAA129YH20' >
- Clone 'AHC0AAA224YI23' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S262.g03800.01.t
Possible name(s)
ADGRB3; HMCN1; SEMA5A
Gene model
Location
S262 [1,361 / 7,203]
Amino acid sequence
Length: 668
>Haaura.CG.MTP2014.S262.g03800.01.p
SGTPWNEWSPCSVTCGTGEHRRHRSCEKNGKVCSEHDTITCILINCKTPDKDAKRYRTWS
EWSPCNATCSHGITKRHRECLRDTNPDTCREHQSKSCYDKGCSKNSVDNRNPAWNAWGSW
GACSESCGGGRRSRTRTCQLDSRIQECTQEHILAICNEHQCGLKADKVIWNDWSNWSDCS
TPCGPGNQRKTRTCNLGHSGSECAKGGQEFRGCNNPCKAQWGSWAPWSSCDATCGQGQAL
RNRQCLNERQTTTCFGNATQLQICVLKNCRTWPQWTKWSPWRECSSSCGPGEIIKTRLCM
NGTAISNSCRGGHVRRVSCRGNCTVANNWSEWSGCSETCGTGFRRRTRICLAKRCVNPVG
EENEECNTQQCGEGNYSQCGIAGDVRQILTGRQVARVVRGYNAARGAWPWQVMIVNKAAN
IRESLKTEFLGGGGSLVNNKYVLSASHMLGKDENNYLIILGLTVIPRKNEEIPRHIQVYS
VEKFETHEKFDKYDFDYDIALIKLGSRMLFNNNGTFLEVKSPSPHVSFSKYVRPICLPCI
GAYEETKMYTIKYGVKMQVYEEENCDIEERKIISPKLGEGLAVVTGYGYITSRITNTEVS
SRPEVLQQALLRMLDHRKCKEGVAKIVESIAWEAANYTTRMICTKSASTTVISDACQGDS
GGPLVRQV
Nucleotide sequence
Length: 2,004
>Haaura.CG.MTP2014.S262.g03800.01.t
TCAGGGACTCCGTGGAATGAGTGGTCTCCGTGTAGCGTTACCTGCGGAACAGGAGAACAT
CGAAGACACAGAAGTTGCGAGAAAAACGGCAAAGTATGCAGCGAACACGACACAATTACT
TGTATACTGATAAACTGCAAAACTCCAGACAAAGATGCAAAACGTTACCGGACCTGGTCT
GAATGGTCTCCGTGTAATGCAACTTGCAGTCACGGAATAACGAAACGCCATCGCGAATGT
TTACGAGATACAAATCCTGACACTTGCAGAGAGCATCAAAGTAAATCTTGCTATGATAAA
GGCTGTTCAAAGAATTCTGTTGATAATAGGAATCCAGCCTGGAACGCATGGGGGTCTTGG
GGAGCATGTAGCGAATCATGCGGCGGTGGTAGGCGCTCTCGCACAAGAACTTGCCAACTG
GATAGCAGGATACAAGAATGCACTCAAGAACATATACTAGCAATATGTAACGAGCATCAA
TGTGGATTGAAAGCAGACAAAGTTATTTGGAACGACTGGTCAAACTGGAGCGACTGCTCG
ACTCCGTGCGGTCCTGGAAATCAAAGAAAAACACGAACCTGCAATCTCGGTCACTCGGGA
AGCGAATGTGCTAAAGGCGGCCAGGAGTTCCGTGGCTGCAACAATCCGTGCAAAGCGCAA
TGGGGAAGTTGGGCTCCGTGGTCATCATGTGACGCTACATGCGGACAAGGACAAGCTCTA
CGAAATAGACAGTGCTTGAATGAAAGACAGACTACAACCTGCTTCGGGAATGCAACTCAG
TTACAGATTTGTGTTCTAAAGAATTGTAGAACTTGGCCACAATGGACAAAATGGAGTCCG
TGGAGGGAATGTTCATCGTCATGCGGACCCGGTGAAATCATCAAAACACGGCTTTGTATG
AACGGTACTGCAATTTCAAACTCATGCAGAGGAGGCCACGTGCGACGAGTAAGTTGCAGA
GGGAACTGCACTGTTGCAAACAATTGGTCAGAATGGAGTGGCTGTTCCGAAACCTGCGGT
ACAGGATTCAGAAGAAGGACGAGAATATGCTTAGCAAAGAGGTGTGTGAATCCGGTGGGT
GAAGAAAATGAAGAATGTAACACTCAGCAATGCGGGGAAGGAAATTACAGCCAATGTGGG
ATAGCCGGCGATGTTCGCCAGATTCTAACAGGCCGACAGGTGGCACGCGTTGTGCGAGGT
TATAACGCAGCGCGAGGTGCATGGCCGTGGCAAGTTATGATTGTGAATAAAGCTGCAAAT
ATCAGAGAAAGTCTAAAAACTGAATTCCTTGGTGGAGGAGGTTCGCTGGTCAACAACAAA
TATGTACTGAGCGCTTCTCACATGCTTGGAAAGGACGAAAACAACTATCTCATTATACTA
GGTCTCACCGTGATTCCAAGGAAAAACGAAGAGATTCCGAGACACATTCAGGTTTACAGC
GTGGAAAAATTCGAGACTCACGAAAAGTTCGATAAATATGATTTTGATTACGATATTGCA
CTGATAAAGCTAGGCAGCAGAATGCTGTTTAACAATAACGGTACATTCTTGGAGGTCAAA
TCGCCGTCTCCCCACGTTAGCTTTTCAAAATACGTCAGACCCATATGCCTGCCATGTATC
GGTGCGTACGAGGAAACGAAAATGTACACAATCAAATACGGCGTCAAAATGCAGGTTTAT
GAAGAAGAAAACTGTGACATAGAAGAACGAAAAATTATAAGTCCAAAGTTGGGAGAAGGA
CTTGCCGTTGTGACCGGGTACGGCTACATTACTTCGAGGATAACGAACACAGAAGTCAGC
TCACGGCCGGAAGTTTTACAACAAGCACTGTTGAGGATGCTAGATCACCGAAAGTGCAAG
GAAGGAGTAGCGAAAATCGTGGAATCGATTGCATGGGAAGCAGCAAATTACACAACAAGA
ATGATCTGTACGAAATCCGCAAGTACAACTGTTATATCGGACGCATGTCAAGGTGACAGT
GGCGGACCATTAGTCAGACAGGTA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[1-49] 5.7E-10 - T[50-106] 1.8E-7 - T[107-166] 1.3E-8 - T[167-216] 7.7E-8 - T[217-269] 2.3E-9 - T[272-316] 7.0E-5 - T[317-378] 5.6E-10 |
| SMART |
TSP1_rpt (IPR000884) - T[2-47] 3.0E-8 - T[56-103] 7.1E-7 - T[114-162] 2.3E-8 - T[170-218] 1.4E-8 - T[221-270] 2.9E-9 - T[275-324] 0.13 - T[326-372] 3.1E-9 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[3-34] 1.7E-7 - T[57-97] 1.19E-6 - T[111-144] 6.8E-9 - T[169-214] 4.19E-9 - T[216-269] 4.19E-10 - T[273-319] 2.88E-6 - T[326-371] 8.89E-8 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[3-47] 9.285 - T[53-103] 9.648 - T[111-162] 10.921 - T[167-215] 9.52 - T[218-270] 10.928 - T[272-320] 9.318 - T[323-372] 11.173 |
| Pfam |
TSP1_rpt (IPR000884) - T[4-38] 1.5E-9 - T[58-102] 8.2E-7 - T[116-161] 2.0E-6 - T[172-216] 4.8E-7 - T[223-269] 9.9E-11 - T[277-320] 9.2E-4 - T[328-371] 1.3E-5 |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[389-541] 1.0E-36 - T[574-668] 1.0E-36 |
| SMART |
Trypsin_dom (IPR001254) - T[396-668] 4.1E-19 |
| CDD |
Trypsin_dom (IPR001254) - T[397-668] 2.04645E-36 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[397-668] 20.254 |
| Pfam |
Trypsin_dom (IPR001254) - T[398-554] 2.5E-17 - T[583-666] 1.4E-9 |
| PRINTS |
Peptidase_S1A (IPR001314) - T[433-448] 1.3E-7 - T[653-665] 1.3E-7 |
| ProSitePatterns |
TRYPSIN_SER (IPR033116) - T[654-665] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 32.923 % | 138 | 1.28E-33 |
| AGRB3_HUMAN | 36.62 % | 121 | 2.63E-28 |
| SEM5A_HUMAN | 26.185 % | 114 | 2.58E-26 |