- Clone 'AHC0AAA224YB20' >
- Clone 'AHC0AAA222YE07' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S265.g03842.01.t
Possible name(s)
RABGAP1; TBC1D1; TBC1D4
Gene model
Location
S265 [53,841 / 57,039]
Amino acid sequence
Length: 1,066
>Haaura.CG.MTP2014.S265.g03842.01.p
MEPQVNESFNVKYCGQALIHSYFTESMLPWIAAEINLTSAVCEHASIKVQNDVIDVEKTN
SSPAVENKSEEACEISCNDLITFNDNDRIESIMQSGTDDTLSSHSHCITEHVFQCTYAQI
VHVTVIVLHQQSPHLAVLFQESKDSPILSHMFSSDDPNLMFKVLNVIKARISQKRKNGMH
YDMTSYVRWNGEDTDSVRFEVMLLGVVNLKNPNPAHCLIDEAVANYQSKQPVSVRHSSGH
DKVLKPDSTNNNVGAAYESSLAPLNSLIDDSREGAWQLMRNLDARQRCNSVGQAQKPMVR
RRQRHSSEPSTYDTNLQKSKIRLFQIGKDAIKLFCPAKSIRPFEIEFSNISRCMQGIVNK
DHFGIIANKRDHSTTQQQSHTVNDSKHNAHKKFSCYIYKCNEDYVCEEIMQGIKQAFLTC
MDNASPMRDYDLLCKNVNAVSVQDALAIVKQSMRKLTDSEIEILKAQLLELKPQTQREKL
SSVMGSLRHMYEVKQVEHIKEIQKVQPFEHQPAITVTKTFDNIRSKAKNSFESLLQRGKK
KMQELQLDAEHFSERNIISPVDKLKFFADTLSHSSPNTPQKQNRKNNEPLTDFGYIPDKS
KHSSCDIDLATDENKELYYRKIFKDIAITSSSHIDGALPQCKRKIVVEKEIKKSPQEIRE
LWKWAIQQQMLLQRINKVDKTQLAAFKTSPLHYIDLTPIPKDMDVIWDEIFQMSSDEKRG
LDDKILCAAVKTGILNNDRGRVWKLFRCRWQDNKETVCESIMKEESYEIVIENLTPYQHA
ILIDIGRTFPSHPMYSQQLGTGQLSLFNVLKAYSLLDEEVGYCQGLSFIAGVLLMHTCVE
REAYQLLCCLMYDVGCRNMYLPDMKGMKLAVYKVTRLLYDMEQDIYNFFEKHQVSMMLVA
TPWFLTMFASSFPLHFVARVFDMVFFEGSSALFKIAVSLLQQHKNKIMACEDFEDIVNYI
RSQIPESDVQTMQEVIEKAMTMNINNVLQDYEVEYKVLQEGTIIAKQKMNEIKSLEEDIH
CLQQVNQKVTESNCDLLHQLNEAQQKIASLQKLLKDKTALQPKLP*
Nucleotide sequence
Length: 3,198
>Haaura.CG.MTP2014.S265.g03842.01.t
ATGGAACCACAGGTAAATGAGAGTTTCAATGTGAAATATTGCGGCCAAGCTTTGATTCAC
TCGTATTTCACCGAGTCCATGCTTCCATGGATTGCAGCAGAAATAAACCTGACCTCAGCT
GTGTGTGAACATGCCAGCATTAAGGTTCAGAACGATGTTATTGACGTGGAAAAAACAAAT
TCGAGTCCTGCTGTAGAAAACAAAAGTGAAGAGGCATGTGAAATTTCCTGTAATGATCTT
ATAACATTCAATGATAATGACCGCATAGAATCAATCATGCAGAGTGGCACAGATGATACC
CTGAGTAGCCATTCACATTGCATCACAGAGCATGTTTTCCAATGCACCTATGCACAAATA
GTTCATGTAACTGTGATTGTTTTACATCAGCAATCCCCTCATCTAGCTGTTCTCTTTCAA
GAAAGCAAAGATAGTCCGATTTTGTCACACATGTTTTCAAGTGATGATCCGAATCTAATG
TTTAAAGTTCTCAATGTGATAAAAGCCAGGATATCCCAGAAAAGAAAAAATGGTATGCAC
TATGATATGACCTCATATGTCAGATGGAATGGTGAAGACACGGATAGCGTAAGATTTGAA
GTGATGTTGCTTGGAGTCGTGAATTTGAAGAATCCTAATCCCGCTCATTGTCTAATCGAT
GAGGCCGTCGCCAACTATCAGAGTAAGCAACCCGTTTCTGTGCGCCATAGCTCCGGACAT
GACAAAGTACTAAAGCCGGATTCTACTAACAACAATGTTGGTGCTGCATATGAATCAAGC
CTTGCCCCACTTAATTCACTCATCGATGATTCTAGAGAAGGAGCATGGCAGTTAATGAGA
AATTTAGATGCCAGACAACGATGTAACTCAGTCGGTCAAGCGCAAAAACCCATGGTACGA
CGGCGGCAAAGGCACAGTAGTGAACCTAGTACATACGATACGAATCTTCAAAAAAGCAAG
ATTCGACTTTTTCAAATTGGAAAGGATGCCATTAAGTTGTTCTGCCCTGCCAAATCGATT
CGCCCCTTCGAGATTGAGTTTTCTAATATTTCTCGATGCATGCAAGGGATTGTAAACAAA
GATCACTTTGGCATAATAGCAAACAAAAGAGATCATTCCACCACACAACAACAATCTCAT
ACAGTAAATGACTCGAAGCACAATGCACATAAAAAGTTTTCATGCTACATATACAAATGC
AATGAAGACTATGTTTGTGAGGAGATAATGCAAGGAATTAAGCAAGCTTTCCTAACATGC
ATGGATAATGCTTCTCCAATGCGAGATTACGACCTTTTATGCAAAAATGTCAATGCTGTA
TCGGTGCAAGATGCGTTAGCTATAGTGAAACAGTCAATGCGGAAATTGACTGACAGTGAG
ATAGAAATCCTTAAAGCACAGCTGCTTGAATTAAAACCTCAAACTCAAAGAGAAAAGCTC
TCTTCTGTAATGGGATCGCTTCGACACATGTATGAAGTGAAGCAGGTGGAACACATTAAG
GAAATACAAAAAGTTCAACCCTTTGAACATCAACCTGCTATAACGGTCACCAAAACCTTC
GATAATATACGGAGCAAGGCTAAGAATTCATTCGAAAGTCTGTTGCAGAGAGGGAAGAAG
AAAATGCAAGAACTGCAGTTGGATGCCGAGCATTTTTCCGAGCGAAATATTATCAGCCCC
GTTGACAAGCTGAAATTTTTTGCAGACACGTTGTCACACTCCTCACCGAACACGCCTCAA
AAGCAGAACAGAAAGAACAATGAACCGTTAACAGACTTTGGTTACATTCCTGATAAATCG
AAGCATTCATCTTGTGATATTGATCTAGCCACTGATGAGAACAAAGAACTGTACTATCGT
AAGATTTTCAAGGACATTGCCATCACCAGTTCCTCCCACATCGATGGTGCATTACCTCAA
TGTAAACGAAAGATTGTTGTGGAGAAAGAGATTAAAAAGTCACCTCAAGAAATTAGAGAA
CTTTGGAAATGGGCAATTCAACAGCAAATGTTGTTGCAAAGAATCAATAAAGTCGATAAA
ACACAGTTAGCTGCTTTCAAAACTTCTCCTTTACATTACATTGATCTCACTCCTATTCCA
AAAGATATGGATGTGATATGGGATGAAATTTTTCAGATGTCTTCTGACGAGAAAAGAGGC
TTAGATGATAAAATTTTATGTGCCGCAGTAAAAACTGGAATACTTAACAATGACCGCGGA
AGAGTGTGGAAACTCTTTCGATGCCGTTGGCAAGACAATAAGGAAACTGTGTGTGAATCT
ATTATGAAAGAGGAGTCTTATGAAATAGTAATAGAAAATTTGACACCATACCAGCACGCC
ATACTCATAGACATCGGAAGAACCTTTCCATCGCACCCCATGTATAGTCAGCAGCTTGGT
ACTGGGCAACTGAGTCTTTTCAATGTCCTCAAAGCATATTCACTTTTGGATGAAGAAGTA
GGCTATTGCCAGGGGTTATCCTTCATTGCAGGCGTACTGTTGATGCATACCTGCGTTGAA
AGAGAAGCCTATCAGCTCTTGTGCTGTCTTATGTATGACGTGGGCTGTCGAAACATGTAT
CTTCCAGACATGAAAGGCATGAAGTTGGCTGTGTACAAAGTGACAAGACTGCTTTATGAT
ATGGAACAAGATATCTACAATTTTTTTGAAAAGCATCAAGTCTCCATGATGCTTGTTGCA
ACACCATGGTTTCTGACAATGTTTGCGTCCAGCTTTCCTTTGCATTTTGTTGCTAGGGTG
TTTGATATGGTTTTCTTTGAAGGAAGCTCTGCACTATTCAAGATTGCTGTTAGCCTGCTG
CAACAACACAAAAATAAAATCATGGCTTGTGAAGATTTTGAAGATATAGTCAACTACATA
AGATCTCAAATACCTGAGAGTGATGTACAAACAATGCAAGAAGTTATTGAGAAAGCTATG
ACGATGAACATAAATAATGTGCTCCAAGACTATGAAGTAGAATATAAGGTTTTGCAAGAG
GGAACAATAATTGCTAAACAAAAAATGAATGAAATCAAGTCGTTAGAGGAAGACATTCAT
TGCCTCCAACAAGTAAATCAAAAAGTAACGGAGAGCAATTGTGACCTATTGCATCAGCTG
AATGAGGCACAGCAGAAAATAGCATCACTGCAAAAACTGCTGAAGGACAAAACAGCACTG
CAGCCAAAACTTCCATAG
| Gene3D |
PH-like_dom_sf (IPR011993) - T[278-428] 1.6E-7 |
| Pfam |
DUF3350 (IPR021785) - T[644-677] 5.8E-8 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[712-887] 9.42E-34 - T[863-981] 8.11E-27 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[730-951] 8.9E-55 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[733-928] 27.157 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[739-948] 1.3E-49 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBGP1_HUMAN | 32.915 % | 181 | 2.5E-46 |
| TBCD1_HUMAN | 41.943 % | 343 | 9.25E-101 |
| TBCD4_HUMAN | 39.952 % | 321 | 2.9E-92 |