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TRANSCRIPT CARD

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  1. Clone 'ma337j13' > 
  2. Clone 'cign037l12' > 
  3. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S2812.g09902.06.t

Possible name(s)

ZNF112; ZNF235; ZNF570

Gene model

Haaura.CG.MTP2014.S2812.g09902

Location

S2812 [4,614 / 7,601]

Sequences

Amino acid sequence

Length: 284

>Haaura.CG.MTP2014.S2812.g09902.06.p
MVIHCEVCDLPCSSKTHLKIHMRKHTKETPFKCDVCERSFSQEINMKTHMRIHTQEKPNR
CEVCERRFSHRSSLKIHMLIHTNEKPFQCEICKKSFRHSAAVKLHIKTVHMKLKPHWCEV
CDKSFGRKSHFNTHMKIHLNIKMFECEICHKHFSRRGGLKVHMRIHAKEKLFKCDMCRAK
FAHSGNRNNHKKSMHSVMNCKCSVCGNTFTSKYDLKIHKQEEHKGSPHKYHCEVCDLICS
TPNRLTEHMRVHTKVKPFNCDICNIAFGRLYDMKTHKRKFHKR*

Nucleotide sequence

Length: 852

>Haaura.CG.MTP2014.S2812.g09902.06.t
ATGGTGATACATTGTGAGGTTTGTGATTTACCGTGTTCATCTAAAACTCATCTCAAGATA
CACATGAGAAAACACACAAAGGAAACGCCATTTAAATGTGACGTATGTGAGAGAAGTTTT
TCCCAAGAAATAAATATGAAAACACACATGAGAATCCACACGCAGGAGAAACCGAATCGC
TGTGAAGTTTGCGAAAGGCGATTCTCACACAGGAGCAGTCTGAAAATACATATGCTAATC
CACACCAATGAAAAACCTTTTCAATGTGAAATATGTAAAAAATCCTTTCGACATTCTGCA
GCAGTGAAATTACACATAAAAACTGTTCATATGAAATTAAAACCGCATTGGTGCGAAGTC
TGTGATAAATCGTTTGGTCGGAAATCACATTTCAATACTCACATGAAGATTCATCTGAAT
ATTAAGATGTTTGAATGTGAGATTTGTCATAAACATTTTTCACGGAGAGGAGGTTTGAAA
GTCCACATGAGAATTCACGCAAAAGAGAAATTATTTAAATGTGACATGTGCCGTGCAAAA
TTTGCACATAGTGGAAATCGCAACAATCACAAGAAAAGCATGCACAGTGTAATGAACTGC
AAGTGTTCGGTATGTGGAAATACATTCACATCGAAATATGATTTGAAAATACATAAGCAA
GAAGAACATAAAGGATCTCCCCACAAATATCATTGTGAAGTTTGTGATTTAATATGTAGT
ACTCCCAATCGTTTGACTGAACATATGAGAGTTCATACGAAGGTAAAACCTTTCAATTGT
GATATATGCAATATAGCCTTTGGACGTCTTTACGACATGAAAACGCACAAACGAAAGTTC
CACAAGAGATAG

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[3-25] 0.04 - T[31-53] 1.4E-4 - T[59-81] 0.0048 - T[87-110] 0.0023 - T[116-138] 0.077 - T[144-166] 2.1E-4 - T[172-195] 0.2 - T[200-223] 0.017 - T[230-252] 6.8E-4 - T[258-281] 0.17
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[3-30] 10.45 - T[31-58] 15.438 - T[59-86] 14.108 - T[87-115] 12.487 - T[116-143] 11.406 - T[144-171] 13.568 - T[172-196] 9.307 - T[200-228] 10.325 - T[230-257] 11.281 - T[258-283] 9.764
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[4-53] 5.2E-14 - T[39-96] 1.05E-20 - T[124-181] 3.28E-16 - T[166-218] 2.92E-9 - T[229-278] 6.1E-12
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[5-25] . - T[33-53] . - T[61-81] . - T[89-110] . - T[118-138] . - T[146-166] . - T[174-195] . - T[200-223] . - T[232-252] . - T[260-281] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN112_HUMAN 37.591 % 200 1.23E-58
ZN227_HUMAN 36.678 % 193 1.73E-56
ZN235_HUMAN 38.686 % 193 1.62E-56