- Transcript 'Cisavi.CG.ENS81.R2.2...' >
- Transcript 'KH2012:KH.C1.1279.v1...' >
- Clone 'cien111459' >
- Transcript 'KH2012:KH.L18.20.v7....' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S283.g03972.01.t
Possible name(s)
LGR4; LGR5; LGR6
Gene model
Location
S283 [39,055 / 40,370]
Amino acid sequence
Length: 141
>Haaura.CG.MTP2014.S283.g03972.01.p
MLNENKIETLPGMAFAGNPDIEILSLENINDQVEFPDFSDCSALQKLTISGGKISSLPSN
LCNNLPSLEYLSVDRNRLRNLSGLQSCQHLTVLRASQNEVVKLRSSEMSNLNTLQELDLS
GNDIDEIDQDAFSTMSLQRL*
Nucleotide sequence
Length: 549
>Haaura.CG.MTP2014.S283.g03972.01.t
ATGTCTGCTCGCCATGTCCCGGGACCCCGATGTTGTCTAAACTGAACTATAATTTGTGAC
ACTAAGCTACAATGCAAACAGAAATCTATTGGTAAAACTAATGGATTGCTTTGTAATCTG
CTTAGGATGCTGAATGAAAACAAGATTGAAACTCTTCCTGGAATGGCGTTTGCTGGAAAT
CCAGATATCGAAATCTTGTCGTTGGAAAATATCAATGATCAAGTAGAATTTCCAGATTTT
TCCGACTGCTCCGCACTACAGAAACTAACTATATCTGGTGGTAAAATCTCCTCACTTCCT
TCGAATTTGTGCAACAATCTGCCGTCGTTAGAATATCTTTCGGTAGATCGAAATCGACTA
CGTAACCTCTCTGGCTTACAATCGTGTCAGCACCTGACAGTTCTCCGCGCTAGTCAAAAC
GAGGTTGTGAAACTGAGATCAAGCGAAATGAGTAATTTAAACACTCTTCAAGAATTAGAT
CTAAGCGGAAACGATATAGATGAAATTGACCAGGATGCTTTTTCCACCATGTCGCTTCAA
CGATTGTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[1-140] 1.7E-27 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[41-64] 200.0 - T[65-89] 8.1 - T[111-134] 1.0 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[43-99] 4.8E-7 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[43-64] 5.356 - T[67-88] 7.72 - T[89-110] 4.824 - T[113-134] 8.12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LGR6_HUMAN | 35.075 % | 83.6 | 1.26E-19 |
| LGR5_HUMAN | 34.091 % | 84.7 | 5.41E-20 |