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- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S284.g03982.01.t
Possible name(s)
HDAC4; HDAC5; HDAC7
Gene model
Location
S284 [41,334 / 49,903]
Amino acid sequence
Length: 836
>Haaura.CG.MTP2014.S284.g03982.01.p
MQQMYKLPGRFADIDGVHPYAAQLLQQQQTAKAMLALSLAEVGEKGSSPPGPIRHAPMTR
PHKALSRTHSAPTTTAQLQQHIQRKRLLQQQHKHAPYYLTGLSAEPSHYRPLATHKESVE
HAESSKQRLPKKLAASPPPTHPSAISSTTAAALVSHLGNKKSGGSYHHFSPHPDRKSISP
PSSSMDHSPTIMDKLSRSVIVAPSSSSHQDSCSDQEDVDVIEVKREQLSPVPDKAPIDYS
PNLGHKQTVAMALKSKMGMSQDHLPFHPSALKGRRSLLDGEMGLHRPLLRTQSSPAVSFT
QKQPHKKYRYTTGIGYDAVMLRHGCACGDPHAEHSGRLKEIWSRLTNTGLDKECENIDTR
KATMAELQLAHTEEHTLRYGATPLARQQSVVTNKFIILPCGGVGVDNGIDIDTVWNELDT
INAARMAVGLTVDLALSVAANELRNGFALVRPPGHHAEKDLAMAFCYFNSVAVSARQLQQ
TYPDKMRRILIVDWDVHHCNGTQNIFYDDPTVLTGEGAGVGFNVNIGFSGGLNPPMGDAE
YLAAFRTVVMPIAEEFDPDFVLVSAGFSAVDGHPSVLGGYKVTPQCFGYLTGLLTELANG
RIVMALEGGFVLDPLCDSVEICVRTLLSEGNAANVAANSLSESSLNGIPCDNARYWSRLK
RMCSYANISQAAYLGQEQADRACVALASLTVDQVKSKSKDLLGLQSSEQRKSMSKSFDHS
KDKDRDRDEEDDKLVIVTDNTEDPSTDQVRGKETEDDAMSSESSPLDVVGVSSPSPAPSS
SPASSPVRHVSFAVDNVVRRDASPVKPADRGEEKMTSVKEDEPMDQEDSDPSDDK*
Nucleotide sequence
Length: 3,607
>Haaura.CG.MTP2014.S284.g03982.01.t
ATGGCAACAGATCTTGCTGCTGCTGCATCTACGGGCAGTATGAACGATGAGTACCAAAAA
CGACTGTTTGCAATTCGCCATCACCAGCAGCAGCTTGGCGAGCAGGTACTCCTCGCCAAC
TTACAGCAACAGCAACAACTTCAAGAACATTTGAAGCTGTTTTTACACAAACAACAAAAC
GAACAGCGAAGCGCTGAAAACCATCACTTGAGGGCATTGGAAGAGGAGCAACAGCGAAAC
AATCTTGTCAACGCTGTTCTTAATAAGGACAAGAGTAGAGCGAGTGCAAATGCTTCTACT
GCCGTAAAGCAACACTTGCAGAAGTTTGTTATCGGCAGACAGAAAGGGAAAACATTTGAT
GGTTATCCAAACAATGTGATGGAAAGAAATCGTCTCCGATGGACCCCATCTTTAGATAGT
CGGAACGGATATCATGATTTGTCTGCCCCTTATCCGCAATCCATGCTCATGGATAAAAGG
AGCAGTTTCCCTCTTCGGAAGACAGCTTCTGAACCAAACCTGAAATTAAGGTCTCGAATT
CGAGCTAAAGTGACTTCCGATCGTCGAAGCTCACCATTGCTTCCTCGTTCTGCTGACGTG
AGGGCAGATCTGGCAAACCGTATTAAGAGGAAATTGAACACGGCGGAACAAGACCCAAAA
CCGTAAAAATTAGATCTTCCTTGTCTTATTTTTCTCTGCTACCTTGACTAAATTTTATTT
TACTTTTATCAAAGACAATTCAGCTTGCAACAGTGCTCCTAATTCAAGTCCAAGTTCCCC
TCTAAACAGCAACAGCAATATCAACAACAGTTCAACGACCGGCAATAGCATAGCTGCTAG
AGTTGGCCTATTACCAGGTCACAGCAGTTTATCAGAGGCGGAATTCTCAAGCTATGGTTA
CCCACTCAGTATAGATCAGTATAGATCTCTACAGAGTGGTCGCGATCTCTATACTTCACC
TTCACTGCCTAACATTTCTCTTGGAAAATCCGACGGCAGTACAATAATTACCGGTGCTCA
TCCTGGTGTAATTATCTATCCAGATCCCGATTTGCAGCGTTTGGCTCTGGCACGTACCGC
ATCTTTACCTGGTCCTTTGATGCAGCAAATGTATAAATTGCCAGGAAGATTTGCAGACAT
AGATGGAGTTCATCCGTATGCTGCTCAACTTTTACAGCAGCAGCAGACTGCAAAAGCTAT
GCTTGCATTATCTTTGGCAGAGGTGGGCGAAAAAGGCTCCTCACCTCCTGGTCCCATCCG
TCACGCCCCCATGACGAGACCCCACAAAGCGTTGAGCCGAACCCACTCTGCCCCTACCAC
AACCGCGCAATTGCAACAACATATACAGAGAAAACGGTTGCTCCAACAACAACACAAGCA
TGCCCCTTACTATCTGACAGGTTTGTCTGCTGAACCTTCTCACTATAGACCTCTCGCAAC
CCATAAGGAATCCGTTGAACATGCTGAATCGTCTAAACAAAGACTTCCAAAGAAGTTAGC
TGCTTCTCCTCCACCTACACACCCATCAGCAATCTCAAGTACAACCGCTGCTGCGCTCGT
TTCTCACTTAGGAAATAAGAAAAGTGGGGGTTCCTATCATCATTTTTCACCTCACCCTGA
CAGAAAGTCGATTTCTCCTCCTTCCTCGTCCATGGATCATTCTCCGACGATCATGGATAA
ACTTTCCAGATCTGTTATCGTTGCTCCATCTTCCTCCAGTCACCAAGACTCATGCTCCGA
CCAAGAGGACGTTGATGTCATCGAAGTCAAGCGGGAGCAGCTGTCACCGGTGCCAGATAA
AGCTCCGATAGATTATTCTCCCAATCTTGGCCACAAACAAACTGTTGCAATGGCACTGAA
AAGTAAAATGGGCATGTCACAAGACCACTTACCATTCCACCCTTCAGCACTCAAAGGAAG
AAGATCTTTGTTGGATGGCGAAATGGGCTTGCACCGACCTTTGTTACGAACCCAGAGCTC
ACCCGCTGTTTCCTTTACACAGAAACAACCGCACAAGAAATATCGCTACACAACCGGCAT
CGGATATGACGCGGTGATGCTGCGTCACGGCTGCGCCTGTGGCGATCCGCATGCCGAACA
CTCTGGTCGTTTGAAAGAGATCTGGTCACGACTGACCAACACGGGTCTGGATAAAGAATG
TGAAAACATAGACACAAGGAAGGCCACGATGGCTGAACTCCAGTTGGCTCACACGGAAGA
ACACACCCTTCGTTACGGGGCCACACCACTTGCGAGACAGCAGTCAGTGGTCACCAATAA
ATTCATAATATTGCCTTGTGGTGGAGTTGGTGTCGACAATGGAATTGACATTGACACAGT
ATGGAATGAATTGGACACAATCAATGCAGCACGAATGGCGGTTGGCCTGACAGTAGACTT
GGCTCTGAGCGTAGCAGCTAACGAATTGCGCAACGGATTTGCTCTCGTTCGCCCACCTGG
CCATCACGCCGAAAAAGATCTGGCCATGGCCTTCTGCTACTTTAATTCAGTGGCTGTGTC
AGCACGTCAGTTGCAACAGACATACCCTGACAAAATGAGGAGAATCCTCATAGTTGACTG
GGACGTACACCATTGCAATGGAACGCAGAACATTTTCTATGATGACCCGACTGTCCTGAC
CGGCGAAGGCGCAGGGGTTGGGTTCAATGTCAATATCGGCTTCAGCGGCGGATTGAATCC
ACCGATGGGTGACGCCGAGTACCTCGCCGCGTTCCGAACAGTCGTCATGCCTATTGCAGA
AGAGTTTGACCCGGATTTTGTACTTGTCTCGGCGGGTTTCTCTGCTGTGGACGGGCATCC
ATCAGTCTTGGGAGGATATAAAGTAACACCACAATGTTTCGGTTACCTGACCGGTCTTTT
GACGGAACTTGCTAATGGGAGGATCGTTATGGCGTTGGAAGGTGGCTTTGTGCTTGACCC
TTTGTGTGACAGCGTAGAAATCTGCGTACGTACCTTGCTGTCGGAAGGCAATGCTGCCAA
TGTCGCTGCCAACTCTCTTTCAGAATCATCGCTCAATGGTATTCCTTGCGACAATGCGCG
ATACTGGAGTCGACTGAAGAGGATGTGCTCTTACGCAAACATCTCTCAAGCTGCCTATCT
TGGCCAGGAGCAAGCTGATCGTGCGTGTGTGGCTCTGGCATCACTCACTGTTGATCAAGT
AAAATCAAAATCTAAAGATTTATTGGGCCTGCAGTCCTCTGAACAACGGAAATCGATGTC
TAAGAGTTTTGATCACTCTAAAGATAAAGATCGTGACAGGGATGAGGAAGATGACAAGCT
GGTTATTGTGACAGACAACACTGAAGATCCCTCTACAGATCAAGTTAGAGGAAAAGAAAC
TGAAGATGATGCGATGAGTTCCGAATCGTCACCATTGGATGTCGTTGGCGTGTCATCACC
ATCCCCGGCTCCTTCGTCTTCTCCAGCGTCATCGCCAGTGCGGCACGTGTCCTTCGCAGT
TGACAATGTGGTACGACGCGACGCATCTCCTGTTAAACCGGCAGATCGAGGGGAAGAGAA
GATGACTTCCGTGAAGGAAGATGAGCCGATGGACCAGGAAGACAGCGACCCATCGGACGA
TAAGTGA
| PANTHER |
His_deacetylse (IPR000286) - T[234-638] 3.8E-175 |
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[304-514] 9.3E-72 - T[515-685] 2.5E-46 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[309-630] 8.63E-84 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[331-514] 3.0E-38 - T[515-624] 1.3E-15 |
| PRINTS |
His_deacetylse (IPR000286) - T[452-475] 6.6E-13 - T[488-503] 6.6E-13 - T[558-568] 6.6E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC4_HUMAN | 51.204 % | 436 | 4.96E-138 |
| HDAC5_HUMAN | 47.137 % | 403 | 4.38E-125 |
| HDAC7_HUMAN | 46.875 % | 416 | 1.01E-131 |