- Transcript 'Moocul.CG.ELv1_2.S40...' >
- Transcript 'Boleac.CG.SB_v3.S928...' >
- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'Haaura.CG.MTP2014.S2...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S289.g04029.01.t
Possible name(s)
CHERP; SF3A1; SUGP1
Gene model
Location
S289 [36,478 / 40,190]
>Haaura.CG.MTP2014.S289.g04029.01.p
MDIPKPPEEPEVKNIIDKLANFVARNGTEFEKMTKEKQKGNSKFAFLFGGKHYHYYQYRL
STEQQNQNQQKATLAAQQVMAQEAMVQQSLQNAPWQQHQPPMQPPMGGFQQYNQPPLQMP
MRMPPMPPNMPPWQQNQPMSQQPPMSMPSFPPPSNSNNMTGQGSSQSFMNIPPPAMPNPN
MLQQPPPHMQLQQNFPPNLFQPHQGNPPQKHPIPPLMQQTLDLSIVRDSEKKPDDPIKEE
EEKVCSAIEDAKKKIEDSKNNLAQQYQVLMQQQQEKIEIAIVQSQDLKLSKLAVATGVIV
NDFDTVLHPIINACTKDSISVGKSWILSNSKTASHCDVVGLHLLKKIMDAEKLPEDESLG
TKSKFNTQLHIIYLINDVLHHASRKHLMDLSCSLQKVILPIFCMATANAPEDKKERLTKL
LSLWDKFQYFNRDILHKLKDPSSSLSEYQANLIIEHADAVKEVQTEIQKQYNQYQQQHDE
YAAHVNQQVENQKVALEKLKEEAEQARIEKEKEKEANATSNSQRGFGNFEGNEPPWNSGG
NFDMPMQFDYGHGSSNQGPPEVIDYSHQRGPRAPWQGGQEGPPWSSGNAPGPRGPPQRGP
PVIDPNDPSLIPSAPYYDLPAGLMCPLVKTDCLLQWRHFMVHLLMRDLAM
>Haaura.CG.MTP2014.S289.g04029.01.t
ATGTTCAAATGTATTTTTGATGAATGTAAGACTAAATATTATCTCTAACCAATCTTAAAG
GCAATCAATCCAAAAGAACACATGGATATTCCAAAGCCACCAGAAGAGCCAGAGGTCAAA
AATATCATAGACAAATTGGCCAATTTTGTTGCAAGAAATGGTACTGAGTTCGAAAAAATG
ACCAAAGAGAAGCAAAAGGGCAATTCTAAGTTTGCCTTTTTATTTGGTGGAAAGCATTAC
CACTATTACCAATACAGACTGAGCACAGAGCAGCAAAACCAAAATCAACAAAAGGCCACA
TTGGCTGCTCAGCAAGTGATGGCTCAAGAGGCAATGGTGCAGCAATCTCTTCAAAATGCA
CCTTGGCAACAACATCAGCCGCCGATGCAACCACCAATGGGCGGATTTCAGCAGTACAAT
CAGCCTCCTCTTCAGATGCCTATGCGCATGCCACCGATGCCCCCGAATATGCCACCGTGG
CAGCAAAACCAACCCATGTCTCAGCAGCCACCCATGTCGATGCCGTCATTCCCACCACCG
TCAAATTCAAATAACATGACCGGACAAGGTTCATCGCAGTCGTTCATGAACATTCCTCCA
CCAGCTATGCCAAATCCTAATATGTTGCAGCAACCACCACCTCATATGCAGCTGCAGCAG
AACTTTCCTCCTAACCTGTTTCAACCACACCAAGGAAATCCTCCCCAGAAGCATCCTATC
CCTCCCCTGATGCAACAGACACTGGATCTATCGATCGTCAGAGATTCCGAGAAGAAGCCG
GATGATCCCATCAAAGAAGAGGAAGAAAAAGTCTGTTCTGCAATAGAAGACGCCAAAAAG
AAAATCGAAGATAGCAAAAACAATCTTGCTCAGCAATATCAGGTTTTAATGCAGCAACAA
CAAGAGAAGATAGAAATAGCAATTGTACAATCACAGGATTTGAAACTCTCTAAGCTTGCC
GTTGCAACTGGTGTCATAGTGAATGACTTCGATACTGTTTTACACCCAATCATAAACGCA
TGCACCAAAGATTCTATATCGGTTGGGAAATCTTGGATTTTAAGTAATAGTAAGACCGCT
TCCCACTGTGATGTAGTAGGTCTTCATTTGCTAAAGAAAATAATGGATGCAGAAAAACTT
CCTGAGGATGAGTCTCTGGGTACCAAATCCAAATTCAACACTCAACTTCACATCATATAC
TTGATTAACGATGTATTGCATCACGCATCGAGGAAACACCTCATGGATCTCTCATGCTCT
CTGCAAAAAGTTATTCTGCCAATATTTTGTATGGCAACAGCGAATGCCCCAGAAGATAAG
AAAGAAAGATTGACTAAGCTGTTAAGCCTTTGGGATAAATTTCAGTACTTCAATAGAGAC
ATTCTTCATAAGCTCAAAGACCCGTCTTCCTCTCTTTCAGAATATCAGGCCAATTTAATC
ATTGAGCATGCTGATGCCGTCAAAGAAGTCCAGACTGAAATTCAGAAGCAATACAACCAA
TATCAGCAACAACACGATGAATACGCCGCACATGTTAATCAGCAAGTGGAAAATCAAAAA
GTCGCTCTTGAAAAATTGAAAGAGGAAGCAGAGCAGGCTAGAATAGAAAAAGAGAAGGAA
AAGGAAGCGAATGCTACATCAAACAGTCAGCGTGGATTCGGAAACTTTGAAGGAAATGAA
CCTCCTTGGAACAGCGGTGGAAATTTTGATATGCCAATGCAGTTTGACTATGGACATGGA
TCATCTAACCAAGGTCCTCCTGAAGTCATTGATTACAGTCATCAAAGAGGGCCAAGAGCT
CCTTGGCAAGGCGGACAAGAAGGTCCTCCATGGTCGTCTGGGAATGCTCCAGGTCCGAGA
GGTCCGCCCCAAAGAGGACCACCTGTGATAGACCCAAATGACCCCTCCTTGATTCCGTCA
GCACCATACTATGATCTGCCAGCGGGATTAATGTGTCCTTTAGTAAAGACAGATTGCTTG
CTGCAGTGGAGGCATTTTATGGTCCACCTTCTCATGAGAGACCTCGCAATG
Gene3D |
SWAP/Surp_sf (IPR035967) - T[1-70] 1.1E-23 |
SUPERFAMILY |
SWAP/Surp_sf (IPR035967) - T[4-65] 1.13E-18 |
SMART |
Surp (IPR000061) - T[13-65] 6.9E-18 |
Pfam |
Surp (IPR000061) - T[14-60] 1.3E-14 |
ProSiteProfiles |
Surp (IPR000061) - T[15-57] 15.36 |
ProSiteProfiles |
CID_dom (IPR006569) - T[295-446] 22.058 |
Gene3D |
ENTH_VHS (IPR008942) - T[296-453] 4.7E-26 |
SUPERFAMILY |
ENTH_VHS (IPR008942) - T[362-441] 8.24E-6 |
Pfam |
RNA_pol_II-bd (IPR006903) - T[368-430] 6.6E-15 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
CHERP_HUMAN | 37.9 % | 182 | 2.47E-48 |