Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Moocul.CG.ELv1_2.S40...'
  2. Transcript 'Boleac.CG.SB_v3.S928...'
  3. Transcript 'Harore.CG.MTP2014.S2...'
  4. Transcript 'Haaura.CG.MTP2014.S2...'

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S289.g04029.01.t

Possible name(s)

CHERP; SF3A1; SUGP1

Location

S289 [36,478 / 40,190]

Sequences

Amino acid sequence

Length: 650

>Haaura.CG.MTP2014.S289.g04029.01.p
MDIPKPPEEPEVKNIIDKLANFVARNGTEFEKMTKEKQKGNSKFAFLFGGKHYHYYQYRL
STEQQNQNQQKATLAAQQVMAQEAMVQQSLQNAPWQQHQPPMQPPMGGFQQYNQPPLQMP
MRMPPMPPNMPPWQQNQPMSQQPPMSMPSFPPPSNSNNMTGQGSSQSFMNIPPPAMPNPN
MLQQPPPHMQLQQNFPPNLFQPHQGNPPQKHPIPPLMQQTLDLSIVRDSEKKPDDPIKEE
EEKVCSAIEDAKKKIEDSKNNLAQQYQVLMQQQQEKIEIAIVQSQDLKLSKLAVATGVIV
NDFDTVLHPIINACTKDSISVGKSWILSNSKTASHCDVVGLHLLKKIMDAEKLPEDESLG
TKSKFNTQLHIIYLINDVLHHASRKHLMDLSCSLQKVILPIFCMATANAPEDKKERLTKL
LSLWDKFQYFNRDILHKLKDPSSSLSEYQANLIIEHADAVKEVQTEIQKQYNQYQQQHDE
YAAHVNQQVENQKVALEKLKEEAEQARIEKEKEKEANATSNSQRGFGNFEGNEPPWNSGG
NFDMPMQFDYGHGSSNQGPPEVIDYSHQRGPRAPWQGGQEGPPWSSGNAPGPRGPPQRGP
PVIDPNDPSLIPSAPYYDLPAGLMCPLVKTDCLLQWRHFMVHLLMRDLAM

Nucleotide sequence

Length: 2,031

>Haaura.CG.MTP2014.S289.g04029.01.t
ATGTTCAAATGTATTTTTGATGAATGTAAGACTAAATATTATCTCTAACCAATCTTAAAG
GCAATCAATCCAAAAGAACACATGGATATTCCAAAGCCACCAGAAGAGCCAGAGGTCAAA
AATATCATAGACAAATTGGCCAATTTTGTTGCAAGAAATGGTACTGAGTTCGAAAAAATG
ACCAAAGAGAAGCAAAAGGGCAATTCTAAGTTTGCCTTTTTATTTGGTGGAAAGCATTAC
CACTATTACCAATACAGACTGAGCACAGAGCAGCAAAACCAAAATCAACAAAAGGCCACA
TTGGCTGCTCAGCAAGTGATGGCTCAAGAGGCAATGGTGCAGCAATCTCTTCAAAATGCA
CCTTGGCAACAACATCAGCCGCCGATGCAACCACCAATGGGCGGATTTCAGCAGTACAAT
CAGCCTCCTCTTCAGATGCCTATGCGCATGCCACCGATGCCCCCGAATATGCCACCGTGG
CAGCAAAACCAACCCATGTCTCAGCAGCCACCCATGTCGATGCCGTCATTCCCACCACCG
TCAAATTCAAATAACATGACCGGACAAGGTTCATCGCAGTCGTTCATGAACATTCCTCCA
CCAGCTATGCCAAATCCTAATATGTTGCAGCAACCACCACCTCATATGCAGCTGCAGCAG
AACTTTCCTCCTAACCTGTTTCAACCACACCAAGGAAATCCTCCCCAGAAGCATCCTATC
CCTCCCCTGATGCAACAGACACTGGATCTATCGATCGTCAGAGATTCCGAGAAGAAGCCG
GATGATCCCATCAAAGAAGAGGAAGAAAAAGTCTGTTCTGCAATAGAAGACGCCAAAAAG
AAAATCGAAGATAGCAAAAACAATCTTGCTCAGCAATATCAGGTTTTAATGCAGCAACAA
CAAGAGAAGATAGAAATAGCAATTGTACAATCACAGGATTTGAAACTCTCTAAGCTTGCC
GTTGCAACTGGTGTCATAGTGAATGACTTCGATACTGTTTTACACCCAATCATAAACGCA
TGCACCAAAGATTCTATATCGGTTGGGAAATCTTGGATTTTAAGTAATAGTAAGACCGCT
TCCCACTGTGATGTAGTAGGTCTTCATTTGCTAAAGAAAATAATGGATGCAGAAAAACTT
CCTGAGGATGAGTCTCTGGGTACCAAATCCAAATTCAACACTCAACTTCACATCATATAC
TTGATTAACGATGTATTGCATCACGCATCGAGGAAACACCTCATGGATCTCTCATGCTCT
CTGCAAAAAGTTATTCTGCCAATATTTTGTATGGCAACAGCGAATGCCCCAGAAGATAAG
AAAGAAAGATTGACTAAGCTGTTAAGCCTTTGGGATAAATTTCAGTACTTCAATAGAGAC
ATTCTTCATAAGCTCAAAGACCCGTCTTCCTCTCTTTCAGAATATCAGGCCAATTTAATC
ATTGAGCATGCTGATGCCGTCAAAGAAGTCCAGACTGAAATTCAGAAGCAATACAACCAA
TATCAGCAACAACACGATGAATACGCCGCACATGTTAATCAGCAAGTGGAAAATCAAAAA
GTCGCTCTTGAAAAATTGAAAGAGGAAGCAGAGCAGGCTAGAATAGAAAAAGAGAAGGAA
AAGGAAGCGAATGCTACATCAAACAGTCAGCGTGGATTCGGAAACTTTGAAGGAAATGAA
CCTCCTTGGAACAGCGGTGGAAATTTTGATATGCCAATGCAGTTTGACTATGGACATGGA
TCATCTAACCAAGGTCCTCCTGAAGTCATTGATTACAGTCATCAAAGAGGGCCAAGAGCT
CCTTGGCAAGGCGGACAAGAAGGTCCTCCATGGTCGTCTGGGAATGCTCCAGGTCCGAGA
GGTCCGCCCCAAAGAGGACCACCTGTGATAGACCCAAATGACCCCTCCTTGATTCCGTCA
GCACCATACTATGATCTGCCAGCGGGATTAATGTGTCCTTTAGTAAAGACAGATTGCTTG
CTGCAGTGGAGGCATTTTATGGTCCACCTTCTCATGAGAGACCTCGCAATG

InterProScan

Gene3D
SWAP/Surp_sf (IPR035967) - T[1-70] 1.1E-23
SUPERFAMILY
SWAP/Surp_sf (IPR035967) - T[4-65] 1.13E-18
SMART
Surp (IPR000061) - T[13-65] 6.9E-18
Pfam
Surp (IPR000061) - T[14-60] 1.3E-14
ProSiteProfiles
Surp (IPR000061) - T[15-57] 15.36
ProSiteProfiles
CID_dom (IPR006569) - T[295-446] 22.058
Gene3D
ENTH_VHS (IPR008942) - T[296-453] 4.7E-26
SUPERFAMILY
ENTH_VHS (IPR008942) - T[362-441] 8.24E-6
Pfam
RNA_pol_II-bd (IPR006903) - T[368-430] 6.6E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHERP_HUMAN 37.9 % 182 2.47E-48