- Transcript 'KH2012:KH.C10.87.v1....' >
- Transcript 'KH2012:KH.C5.184.v1....' >
- Molecular Tool 'cicl31m21-MO' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S302.g04142.01.t
Possible name(s)
RBMS1; RBMS2; RBMS3
Gene model
Location
S302 [19,355 / 35,085]
Amino acid sequence
Length: 557
>Haaura.CG.MTP2014.S302.g04142.01.p
MPPPSPSTASSTSSSQHSNSTGSPSSGSGSPQNMNLQNNSANQQSGMNNFNGHSQMNGQG
DLSKTNLYIRGLTPNTSDEDLVNLCKQYGKIVSTKAIIDPQTSLCKGYGFVDFDRYESAV
LAVTQLKAKGIQAQMAKQQEQDPTNLYLSGLPPNFNEHDLEQMLLPYGQVISTRILRDSN
GVSKGVGFARMESKEKCEVIITKFNGKYLTGGNTHSTEPLLCKFADGGPKKNKQHQKFMA
NGRTWRDGEMPFPYDPAALTHNGMAPNRIMMQPYLTGPTNPAYQMQAPPTWMQPPPYVVQ
PHVTSSGTVISSMDPNMHMHPSVMPQLSQLTAQMTQLQLSPNPGAISVNNDDVVGSLYQA
VPAAAKALGNESCMQEIAESCSVLVNAHHTRSQAITGFIQGENYENMVGAVKNQEAQSSF
QPVQIFPAIQSQALVSSAPPGFSHLDDNRMMYTEASPVPVPSLYTNCPVNQDIRCTPKMK
IFDTTVKPPFSPPQNHVCGTLLSPTLPQLTSAAIQWSLPFMASLEPAFPFLTQSAYPLAC
PDNLSGSIVINPISPN*
Nucleotide sequence
Length: 2,356
>Haaura.CG.MTP2014.S302.g04142.01.t
ATGACTAAACAGCTTCTCCTATTTCGTTCACTACTTCGTCATAGCGCAGTTTCTGGCGTC
ATTGTTCAGAGTCGTGCATTGAAGCACCGGAATGAAGAGGAGGCACGGCTTCCGCTTCAA
TGCGCAGTATCTCAGTTTTCAATTGATCACTTATAGCGTTAGTTTAAATGGCAAAGCAGC
TCGAGCTTTCCTAGCGTTGAATAGCTGCTTTACGTTATTCAGATTAGAACATACACAAAA
GCCAGCAAATTATTGCTGAACTGTTCTATCACCATATACACAAGGACCATCATTTGCATA
TATCATTTCTATAGAATACAAGTTTCTCTTCCTTTTTCAGCCATACGCTCACGCAACTGC
CCCGCACCACGCTCGCAACATGCCGCCCCCGTCTCCGTCCACCGCTAGTAGCACCTCCTC
TTCTCAACATTCCAACAGTACAGGTAGTCCTTCAAGCGGCTCTGGTAGTCCTCAAAATAT
GAATCTTCAGAATAACTCGGCAAACCAGCAGAGCGGTATGAACAACTTCAACGGTCATTC
GCAGATGAACGGCCAGGGCGATCTGAGCAAGACTAATCTGTATATAAGAGGTCTGACGCC
AAACACGTCGGACGAAGATCTCGTAAATCTATGCAAACAATATGGAAAAATAGTATCCAC
CAAGGCTATTATCGATCCACAAACCAGTCTTTGTAAAGGATATGGATTTGTCGATTTTGA
TCGCTATGAGTCCGCAGTCCTTGCTGTCACCCAGCTCAAGGCCAAGGGAATTCAAGCTCA
AATGGCGAAGCAACAAGAACAAGATCCTACTAATCTCTACCTATCTGGCCTTCCACCTAA
TTTCAATGAGCACGACTTAGAACAAATGCTTCTTCCTTATGGTCAAGTAATCTCTACCAG
AATCCTTCGCGACAGCAATGGTGTCAGCAAGGGAGTAGGATTTGCCAGAATGGAATCAAA
GGAAAAATGCGAAGTCATTATCACCAAGTTTAATGGAAAATATCTAACGGGAGGCAACAC
CCACAGTACTGAGCCCCTCCTGTGCAAGTTTGCTGATGGTGGACCAAAGAAAAACAAGCA
ACATCAGAAGTTTATGGCTAACGGACGGACCTGGAGGGATGGCGAAATGCCTTTTCCTTA
TGACCCTGCTGCCCTGACCCATAATGGGATGGCTCCCAATCGCATCATGATGCAGCCATA
CCTAACAGGACCAACTAATCCTGCTTACCAGATGCAAGCCCCACCAACATGGATGCAGCC
TCCTCCCTATGTTGTACAGCCTCATGTCACCTCTTCTGGCACTGTGATATCGTCCATGGA
CCCCAATATGCACATGCACCCGAGTGTGATGCCCCAGCTCAGTCAGCTGACCGCCCAGAT
GACACAGCTTCAACTCTCACCAAATCCCGGAGCCATTTCGGTAAATAATGATGATGTTGT
CGGTAGTTTATACCAGGCTGTGCCAGCTGCCGCAAAGGCCTTAGGAAACGAATCATGCAT
GCAGGAAATAGCAGAAAGTTGCAGCGTCCTAGTTAACGCTCACCACACCAGGTCTCAGGC
GATAACCGGCTTTATTCAGGGAGAGAATTACGAGAATATGGTAGGAGCCGTCAAGAATCA
GGAAGCTCAAAGCTCTTTTCAGCCTGTTCAGATATTTCCAGCTATTCAGTCTCAGGCATT
AGTAAGCAGTGCTCCCCCTGGATTCTCTCACTTGGATGATAATAGAATGATGTATACTGA
AGCGAGCCCGGTCCCTGTTCCATCACTATACACAAACTGTCCAGTAAATCAGGACATTCG
GTGCACCCCAAAAATGAAAATTTTCGACACAACGGTCAAGCCGCCATTCAGTCCGCCCCA
GAACCATGTCTGCGGCACACTGTTGTCACCAACCCTGCCACAGTTGACCAGCGCCGCCAT
ACAATGGAGCTTGCCATTCATGGCGTCTCTAGAACCTGCATTTCCTTTCTTAACGCAGTC
TGCTTATCCGTTAGCGTGCCCAGATAATCTCAGTGGTAGCATCGTCATTAATCCAATTTC
ACCTAATTAGTTTCAATACGGACCCAATGGTGTTGCTGGCCCATACATTCCACAATACTC
AGCGGCTCCTAGCCTACCTTTACAGATAGAAGATGGTATGGGTGCTTCCATCAACAGCCA
CCAACAGCAACCAGTAGTGACAGTGAGTTCACAGGCGACCAAATTATGTGAAAGATTGAT
GATTTTGACTTTTCTGAAATTTTTGGTTTATTATTCCGCTGTGAAGACAATGAAGCGAAG
AAGAAGAAAAATACTCTTGAATCGTTATGATGAACATCTTTATCGTAGTCACGCTATTCC
CCCGTCGTCCAAGTGA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[27-137] 2.1E-19 - T[138-235] 1.5E-18 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[64-211] 7.47E-33 |
| PRINTS |
Hud_Sxl_RNA (IPR002343) - T[65-80] 3.9E-5 - T[149-164] 3.9E-5 - T[164-176] 3.9E-5 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[65-138] 14.095 - T[144-227] 14.078 |
| SMART |
RRM_dom (IPR000504) - T[66-134] 8.2E-14 - T[145-218] 4.2E-13 |
| Pfam |
RRM_dom (IPR000504) - T[67-129] 1.4E-13 - T[146-211] 6.2E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBMS2_HUMAN | 54.369 % | 299 | 1.39E-96 |
| RBMS1_HUMAN | 55.446 % | 302 | 1.01E-97 |
| RBMS3_HUMAN | 56.61 % | 301 | 3.72E-97 |