- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S3055.g10062.01.t
Possible name(s)
CCT2; CCT7; TCP1
Gene model
Location
S3055 [1,116 / 8,889]
Amino acid sequence
Length: 536
>Haaura.CG.MTP2014.S3055.g10062.01.p
QMSLAPISIYKPGADEEKAETARMSSFIGAIAIGDLVKSTLGPKGMDKILMSAGQNNMEP
SITVTNDGATILKAIGVDNPSAKVLVDMSKVQDDEVGDGTTSVTVLAAELLREAEKLVGQ
KLHPQTIIAGWRNATDSARKAIVASAIDNGKDAEKFREDLMNIARTTLSSKLLTQHKDFF
AKIAVDAVLRLKGSGNLEAIQIIKKLGGTMTDSVLDEGFLLDKTIGVNQPKRIENANILL
ANTSMDTDKIKIFGSRVRVDGTAKIAEIELAEKQKMKEKVEKIVAHNINCFINRQLIYNY
PEQLFADSGIMAIEHADFEGIERLALVLGGEICSTFDRPDLIKVGHCKLIEEVMIGENKM
IKFSGVEKAEACTIILRGATQQILDEAERSMHDALCVLSQTVKETRTVYGGGCSESIMAQ
AVDELAVRTPGKESMAIESFARALRQIPTIIADNAGYDSAELVSQLRAAHTEGRHTMGLD
MEQGKIGCMKELGITESFQVKRQVLMSASEAAEMILRVDDIIKSAPRQRRPDHPH*
Nucleotide sequence
Length: 1,608
>Haaura.CG.MTP2014.S3055.g10062.01.t
CAGATGTCACTAGCTCCTATTTCGATCTACAAACCCGGTGCGGATGAAGAGAAGGCTGAA
ACAGCGAGAATGTCCTCTTTCATCGGTGCAATTGCCATCGGAGATCTTGTCAAAAGTACA
CTCGGTCCGAAAGGTATGGACAAAATTTTGATGAGTGCTGGCCAGAACAACATGGAACCG
TCAATCACTGTCACAAACGATGGAGCAACTATATTGAAAGCAATTGGAGTTGATAATCCA
TCAGCAAAAGTTTTAGTTGATATGTCAAAAGTACAAGATGATGAAGTCGGCGACGGCACG
ACATCTGTCACTGTGCTTGCTGCTGAATTGTTGAGAGAAGCAGAGAAACTTGTTGGGCAG
AAACTTCATCCACAAACAATCATTGCTGGATGGAGAAACGCAACGGATTCTGCAAGAAAA
GCTATAGTTGCATCTGCAATTGATAATGGAAAAGATGCGGAGAAATTTCGCGAAGATCTG
ATGAACATCGCACGAACGACGCTCAGTTCAAAACTGCTGACTCAGCATAAAGATTTCTTT
GCCAAGATTGCAGTAGATGCTGTTCTGAGACTAAAAGGCAGCGGAAATCTGGAAGCTATT
CAGATCATTAAGAAGCTTGGTGGAACCATGACAGATTCTGTGTTGGATGAGGGTTTTCTA
TTGGACAAGACAATCGGAGTCAATCAACCGAAACGCATCGAAAATGCAAATATATTGCTC
GCAAATACGTCAATGGACACCGACAAGATCAAGATCTTCGGTTCAAGAGTTCGTGTCGAC
GGAACTGCGAAAATCGCTGAGATCGAGCTTGCGGAAAAACAGAAAATGAAAGAAAAAGTA
GAAAAAATTGTTGCACACAACATCAATTGCTTCATTAATAGGCAATTGATTTACAATTAC
CCGGAACAACTATTCGCTGACTCCGGTATCATGGCTATCGAACATGCCGACTTCGAAGGC
ATCGAGAGATTGGCACTTGTACTCGGAGGTGAAATATGCTCGACGTTTGACCGTCCTGAC
CTCATTAAGGTCGGGCATTGCAAACTCATTGAAGAAGTCATGATAGGGGAAAACAAGATG
ATAAAGTTTTCTGGTGTTGAGAAGGCAGAAGCCTGCACCATCATTCTCCGGGGAGCGACT
CAGCAAATTCTCGATGAAGCTGAACGTTCAATGCACGACGCTCTCTGTGTCTTGTCGCAA
ACGGTCAAGGAAACTAGAACGGTTTACGGCGGAGGCTGTTCTGAGTCTATCATGGCACAA
GCAGTGGATGAACTTGCCGTACGAACGCCGGGAAAAGAATCAATGGCGATAGAATCCTTT
GCCAGAGCGCTGAGACAGATTCCTACTATCATCGCTGACAATGCAGGATATGACAGTGCA
GAGCTTGTGTCACAGCTAAGAGCTGCTCATACTGAAGGAAGACACACAATGGGACTTGAT
ATGGAACAAGGCAAGATTGGTTGCATGAAAGAACTTGGCATCACTGAATCATTTCAAGTC
AAACGTCAAGTCCTGATGAGCGCTTCTGAAGCTGCAGAAATGATTCTAAGAGTTGATGAC
ATCATTAAGTCAGCTCCGAGACAAAGGAGACCTGACCACCCTCACTAA
| PANTHER |
Chap_CCT_beta (IPR012716) - T[4-529] 6.0E-288 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[4-529] 6.0E-288 |
| CDD |
Chap_CCT_beta (IPR012716) - T[9-528] 0.0 |
| TIGRFAM |
Chap_CCT_beta (IPR012716) - T[9-529] 4.8E-288 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[16-149] 3.27E-75 - T[405-525] 3.27E-75 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[32-147] 9.3E-185 - T[406-523] 9.3E-185 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[34-524] 5.4E-144 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[35-51] 7.5E-24 - T[92-111] 7.5E-24 - T[373-395] 7.5E-24 - T[407-419] 7.5E-24 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[38-50] . - T[64-80] . - T[92-100] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[148-216] 9.3E-185 - T[370-405] 9.3E-185 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[157-218] 1.5E-27 - T[371-405] 1.5E-27 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[212-378] 1.57E-41 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[217-369] 9.3E-185 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 35.455 % | 301 | 8.38E-96 |
| TCPH_HUMAN | 36.158 % | 301 | 1.11E-95 |
| TCPB_HUMAN | 77.82 % | 841 | 0 |