Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S305.g04174.02.t

Possible name(s)

RPL32

Gene model

Haaura.CG.MTP2014.S305.g04174

Location

S305 [30,384 / 31,582]

Sequences

Amino acid sequence

Length: 138

>Haaura.CG.MTP2014.S305.g04174.02.p
DMAPRPIVKKKIVKKRVKRFIRHQSDRYHKLKQNWRKPKGIDNRVRRRFKGQYLMPNIGY
GSDKKTRHCLRDHRGFRKFLVHNIRELEVLMMSNRSFCAEIAHAVSSRKRKVLVQRAQEL
DIYVTNPNARLRSEENE*

Nucleotide sequence

Length: 414

>Haaura.CG.MTP2014.S305.g04174.02.t
GATATGGCGCCACGACCAATAGTCAAGAAGAAGATTGTAAAGAAGCGGGTGAAGAGATTC
ATTCGTCATCAATCTGACAGATACCATAAGTTGAAACAAAACTGGAGAAAACCTAAAGGA
ATTGACAACAGGGTAAGGAGACGTTTCAAGGGCCAATATCTCATGCCAAATATAGGTTAT
GGGAGCGACAAGAAAACGAGGCATTGCTTACGTGATCATAGAGGATTCAGAAAATTTCTG
GTCCACAATATTCGTGAACTAGAGGTATTGATGATGTCTAACAGATCTTTCTGTGCCGAG
ATAGCCCACGCCGTTTCGAGTCGTAAACGTAAAGTTCTAGTACAGCGCGCTCAAGAGCTT
GACATTTACGTTACTAACCCGAATGCACGTTTGAGAAGTGAAGAGAATGAATAA

InterProScan

PANTHER	Ribosomal_L32e (IPR001515) - T[3-137] 2.8E-65
SUPERFAMILY	Ribosomal_L32e_sf (IPR036351) - T[4-136] 3.01E-56
SMART	Ribosomal_L32e (IPR001515) - T[17-126] 2.2E-67
Pfam	Ribosomal_L32e (IPR001515) - T[18-126] 2.7E-50
ProSitePatterns	Ribosomal_L32e_CS (IPR018263) - T[20-40] .
CDD	Ribosomal_L32e (IPR001515) - T[20-126] 2.75208E-57
ProDom	Ribosomal_L32e (IPR001515) - T[23-127] 5.0E-48

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL32_HUMAN	75.556 %	209	3.75E-71