- Transcript 'Haaura.CG.MTP2014.S3...'
Transcript Model
Transcript Id
Haaura.CG.MTP2014.S306.g04187.03.t
Possible name(s)
DIXDC1; SPTBN4; SYNE2
Gene model
Location
S306 [30,613 / 32,173]
Amino acid sequence
Length: 520
>Haaura.CG.MTP2014.S306.g04187.03.p
MLRAVETKEALNIQAHQTYVSWVNSQLRKREGCQPIKDLKLDLQDGTVLADLIEIVSGEH
LKEILRSVATVNDMYHNIEIILEFMRSYKIRLHHINEIDLVNGNPKTIMRLISALASHFK
PSSIRKREIPEQDTSTDTDSNLSFNSVLAKLNNESRTAWEVNGTDVAISAVSGTDFRSAS
KDQCTSRSLSNKSSPVFSSTENTPRAKTPREDRVEDVALFNTKFELDECCEELASTHVLA
AHLQHLLVHGSLPQDNCIDNDIIGLQCSDFSDVSPLPQNTNKIKALQSHFDVHNLQCENK
KLKAEVLNLRQKYHAAVSAKDTYQLRVKELERQVKQYEQQKSPLKTNNGRHPPASEDPAV
GDLLHSLRSSFPRHDPKQHVIDTLEEVISSISEQSRCRVRDRYLEPINKKENVRSLNNNN
SAHYSSPVNHKKEQKFTRVIYYRPNHTAPTHATIPKPIGTITLEDFKTVVSHSSRYTYSF
KALDPEFGTVKKELVFDQDEVPGWEGKIVAWLDRKEKII*
Nucleotide sequence
Length: 1,560
>Haaura.CG.MTP2014.S306.g04187.03.t
ATGCTTCGCGCTGTAGAAACGAAAGAAGCCCTGAATATACAAGCCCATCAAACTTATGTA
TCTTGGGTGAACAGCCAATTAAGAAAACGGGAAGGATGCCAACCTATAAAAGACTTGAAA
CTCGATCTCCAGGACGGTACCGTACTGGCTGATTTGATCGAAATTGTCTCTGGAGAACAT
CTGAAAGAAATCTTGCGTTCAGTGGCCACTGTAAATGATATGTATCATAATATTGAAATA
ATTTTGGAGTTCATGCGTTCCTATAAAATTCGTTTGCACCATATAAACGAGATTGATTTG
GTGAATGGCAATCCGAAAACAATAATGAGACTCATTTCTGCCCTGGCTTCACATTTCAAG
CCATCTAGCATCAGGAAACGTGAAATACCCGAGCAAGACACAAGCACAGATACAGACAGC
AACTTGTCTTTCAACTCTGTTCTCGCAAAGTTGAATAACGAAAGTCGTACCGCTTGGGAA
GTAAACGGAACTGATGTAGCTATCTCAGCTGTTTCAGGAACTGATTTCAGGAGCGCTTCT
AAAGATCAATGCACATCAAGATCTCTGTCAAACAAAAGTTCTCCAGTGTTTTCTTCTACT
GAAAATACACCCAGGGCAAAGACCCCGAGAGAAGACAGAGTTGAAGATGTGGCTCTCTTC
AATACAAAGTTTGAATTGGACGAATGCTGCGAGGAGTTAGCCAGTACGCATGTTCTCGCA
GCCCACCTCCAACATCTTTTAGTACACGGATCATTGCCTCAAGACAATTGTATTGATAAC
GATATTATCGGTCTTCAGTGTAGTGATTTTTCTGACGTGTCACCATTACCTCAAAATACA
AATAAAATCAAAGCACTGCAAAGTCATTTTGACGTACACAACCTACAATGCGAGAACAAG
AAGCTAAAAGCTGAGGTACTGAATCTACGGCAAAAGTATCACGCAGCTGTTTCTGCCAAA
GACACTTATCAGCTTCGAGTGAAAGAACTGGAGAGACAAGTGAAACAGTACGAACAGCAA
AAGTCGCCGTTGAAGACGAACAACGGCAGACACCCACCAGCTAGTGAGGATCCTGCTGTT
GGAGATTTACTGCATAGTCTCAGGTCAAGTTTTCCCAGACATGACCCAAAACAGCATGTC
ATCGACACCCTCGAGGAAGTAATTTCTTCCATTTCAGAACAGTCAAGATGTCGCGTCAGA
GATCGTTATCTGGAGCCGATCAATAAGAAGGAAAATGTCAGAAGCCTCAATAACAATAAT
TCCGCACATTACTCAAGCCCTGTGAACCACAAAAAGGAGCAGAAATTCACCAGAGTAATT
TATTATAGACCCAACCACACTGCGCCTACACACGCAACCATTCCGAAACCAATCGGTACA
ATTACACTTGAAGATTTTAAAACTGTTGTGAGTCATTCCAGTAGATACACATACAGTTTT
AAAGCTTTGGACCCGGAGTTCGGGACCGTTAAGAAAGAACTTGTGTTTGATCAGGACGAG
GTGCCGGGTTGGGAAGGTAAAATCGTTGCTTGGCTTGACCGGAAAGAAAAGATAATTTAA
| Gene3D |
CH_dom_sf (IPR036872) - T[3-125] 1.2E-26 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[12-126] 8.12E-25 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[13-120] 13.584 |
| PANTHER |
Dsh/Dvl-rel (IPR015506) - T[14-176] 3.9E-87 - T[133-340] 3.9E-87 - T[348-513] 3.9E-87 |
| SMART |
CH-domain (IPR001715) - T[15-118] 5.3E-8 |
| Pfam |
CH-domain (IPR001715) - T[16-120] 6.7E-17 |
| CDD |
CH-domain (IPR001715) - T[17-119] 1.72456E-12 |
| Gene3D |
DIX_dom_sf (IPR038207) - T[429-517] 5.2E-25 |
| ProSiteProfiles |
DIX (IPR001158) - T[434-516] 20.872 |
| SMART |
DIX (IPR001158) - T[434-516] 1.5E-10 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[435-514] 1.45E-15 |
| Pfam |
DIX (IPR001158) - T[436-513] 9.1E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DIXC1_HUMAN | 50 % | 127 | 5.37E-31 |