Aniseed - Transcript Card

Transcript Model

Transcript Id

Haaura.CG.MTP2014.S306.g04188.01.t

Possible name(s)

DPCD

Gene model

Haaura.CG.MTP2014.S306.g04188

Location

S306 [39,404 / 39,962]

Sequences

Amino acid sequence

Length: 186

>Haaura.CG.MTP2014.S306.g04188.01.p
MIQDGMRKIHYTFTDGAELVEEYDVKSNDIVIRKWRKKTTLGESTKFDYEIGEPENLGAS
LALGVEHMAESSSNPVFFRQDTKKAFQWRIRNLLFPLKVYDVKVEGDTIVVRTSNKKYFK
KFQIPDMQRENISLEESDLTFAHANNTLIIQYKKPKQILDNHEVIVSELKKMKLSGDGDV
DCKQS*

Nucleotide sequence

Length: 558

>Haaura.CG.MTP2014.S306.g04188.01.t
ATGATTCAGGATGGTATGCGTAAAATCCATTATACGTTCACCGACGGCGCAGAACTGGTA
GAAGAATACGACGTAAAATCTAACGACATAGTTATCAGAAAGTGGAGGAAAAAAACAACT
CTCGGAGAGTCGACTAAATTTGATTACGAAATCGGAGAACCTGAGAACTTAGGCGCGTCT
TTAGCTCTGGGCGTGGAACACATGGCAGAATCTTCTTCCAATCCTGTGTTTTTTCGTCAA
GACACGAAAAAAGCATTTCAGTGGAGAATCCGAAATCTATTGTTTCCCCTCAAAGTTTAC
GACGTCAAAGTGGAAGGAGATACGATAGTAGTGAGAACCTCCAATAAGAAATATTTCAAG
AAGTTTCAAATTCCCGATATGCAGAGGGAAAACATCTCACTGGAAGAATCAGATCTAACA
TTTGCTCATGCTAACAATACCTTGATAATACAATACAAAAAGCCGAAGCAGATCTTAGAT
AACCATGAAGTTATTGTCAGTGAACTGAAAAAAATGAAACTTTCTGGAGATGGAGATGTA
GATTGCAAGCAATCATAA

InterProScan

PANTHER	DPCD (IPR026224) - T[1-184] 5.0E-77
Pfam	DPCD (IPR026224) - T[1-174] 8.9E-72
PRINTS	DPCD (IPR026224) - T[19-36] 8.9E-28 - T[75-90] 8.9E-28 - T[90-105] 8.9E-28 - T[109-127] 8.9E-28

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DPCD_HUMAN	50.27 %	199	2.6E-65